Variant report

Variant	rs2192414
Chromosome Location	chr14:78943954-78943955
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10135111	1.00[AMR][1000 genomes]
rs10135475	1.00[AMR][1000 genomes]
rs11159360	1.00[AMR][1000 genomes]
rs1156946	1.00[AMR][1000 genomes]
rs1990530	1.00[AMR][1000 genomes]
rs2052202	1.00[AMR][1000 genomes]
rs2052203	1.00[AMR][1000 genomes]
rs2110424	1.00[AMR][1000 genomes]
rs2192413	1.00[AMR][1000 genomes]
rs2192415	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2192421	1.00[AMR][1000 genomes]
rs2215830	1.00[AMR][1000 genomes]
rs2215831	1.00[AMR][1000 genomes]
rs2215832	1.00[AMR][1000 genomes]
rs2215833	1.00[AMR][1000 genomes]
rs2366099	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2366156	1.00[AMR][1000 genomes]
rs2886581	1.00[AMR][1000 genomes]
rs4899709	1.00[AMR][1000 genomes]
rs4899710	1.00[AMR][1000 genomes]
rs4903756	1.00[AMR][1000 genomes]
rs4903765	1.00[AMR][1000 genomes]
rs6574444	1.00[AMR][1000 genomes]
rs6574449	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6574450	1.00[AMR][1000 genomes]
rs7157498	1.00[AMR][1000 genomes]
rs7158579	1.00[AMR][1000 genomes]
rs7159492	1.00[AMR][1000 genomes]
rs8003367	1.00[AMR][1000 genomes]
rs8003391	1.00[AMR][1000 genomes]
rs8005882	1.00[AMR][1000 genomes]
rs8008949	1.00[AMR][1000 genomes]
rs8017182	1.00[AMR][1000 genomes]
rs8020682	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832837	chr14:78766805-78946526	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv2760000	chr14:78875607-79173528	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2758363	chr14:78903610-79173528	Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78942800-78950600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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