Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10174257	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10184667	0.82[EUR][1000 genomes]
rs1030092	0.85[ASN][1000 genomes]
rs1030333	0.82[AMR][1000 genomes]
rs1030334	0.81[AMR][1000 genomes]
rs11125631	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1157475	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11688894	0.93[EUR][1000 genomes]
rs11903884	0.93[EUR][1000 genomes]
rs13396394	0.82[EUR][1000 genomes]
rs1465360	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1465362	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1465363	0.82[EUR][1000 genomes]
rs17047952	0.94[EUR][1000 genomes]
rs17047986	0.91[EUR][1000 genomes]
rs2081424	0.89[EUR][1000 genomes]
rs2160707	0.81[EUR][1000 genomes]
rs2869827	0.93[EUR][1000 genomes]
rs2869828	0.93[EUR][1000 genomes]
rs4614971	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56969590	0.84[ASN][1000 genomes]
rs57501852	0.85[ASN][1000 genomes]
rs72618681	0.82[EUR][1000 genomes]
rs7587750	0.93[EUR][1000 genomes]
rs7598538	0.80[EUR][1000 genomes]
rs986787	0.91[EUR][1000 genomes]
rs986788	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834093	chr2:56538097-56708677	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1004449	chr2:56538460-56715861	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv874171	chr2:56545845-56727178	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv874172	chr2:56638856-56811749	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv2757800	chr2:56659685-56851198	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv2759052	chr2:56659685-56851198	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:56687200-56688400	Enhancers	Liver	Liver

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