The 2.0 version of rSNPBase

Variant report

Variant rs2218820
Chromosome Location chr12:11131570-11131571
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11095200-11148800 Weak transcription HepG2 liver
2 chr12:11100800-11134200 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr12:11102000-11135600 Weak transcription Aorta Aorta
4 chr12:11111800-11142800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr12:11114000-11134000 Weak transcription Primary T cells fromperipheralblood blood
6 chr12:11114000-11149200 Weak transcription GM12878-XiMat blood
7 chr12:11114200-11131600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr12:11114200-11134200 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr12:11114400-11180200 Weak transcription Primary B cells from peripheral blood blood
10 chr12:11114600-11135400 Weak transcription Dnd41 blood
11 chr12:11114600-11142800 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr12:11114600-11146400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr12:11114600-11146800 Weak transcription Ovary ovary
14 chr12:11121800-11142800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:11122000-11132000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr12:11122000-11136800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr12:11122000-11142600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr12:11122000-11146200 Weak transcription Left Ventricle heart
19 chr12:11122000-11170200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr12:11122200-11168000 Weak transcription HUVEC blood vessel
21 chr12:11126400-11142800 Weak transcription Primary B cells from cord blood blood
22 chr12:11126400-11143000 Weak transcription HSMM muscle
23 chr12:11128200-11131600 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr12:11128200-11142800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr12:11128600-11131600 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr12:11129200-11167600 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr12:11129400-11136000 Weak transcription Lung lung
28 chr12:11129600-11131600 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr12:11131000-11132000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr12:11131400-11131600 Bivalent Enhancer Thymus Thymus
31 chr12:11131400-11132400 Enhancers HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015