Variant report

Variant rs2229590
Chromosome Location chr17:17721165-17721166
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17695400-17723800 Strong transcription Dnd41 blood
2 chr17:17707000-17723000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
3 chr17:17707400-17722400 Weak transcription Primary B cells from cord blood blood
4 chr17:17708000-17723600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr17:17710000-17721800 Weak transcription HSMM muscle
6 chr17:17710200-17724400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr17:17711800-17721600 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr17:17712800-17724000 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr17:17713400-17721600 Strong transcription Sigmoid Colon Sigmoid Colon
10 chr17:17713400-17722800 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr17:17713600-17721600 Strong transcription Primary monocytes fromperipheralblood blood
12 chr17:17713800-17721200 Strong transcription Rectal Mucosa Donor 29 rectum
13 chr17:17714000-17725800 Weak transcription Aorta Aorta
14 chr17:17715000-17722800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr17:17715000-17723200 Genic enhancers Brain Hippocampus Middle brain
16 chr17:17715400-17724600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr17:17715600-17721800 Strong transcription NHEK skin
18 chr17:17715600-17726400 Weak transcription Fetal Kidney kidney
19 chr17:17715800-17722200 Strong transcription Primary T cells from cord blood blood
20 chr17:17715800-17722600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr17:17715800-17724200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr17:17716000-17721200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr17:17716000-17721200 Strong transcription Duodenum Mucosa Duodenum
24 chr17:17716000-17721200 Strong transcription Fetal Intestine Large intestine
25 chr17:17716000-17721200 Strong transcription Fetal Intestine Small intestine
26 chr17:17716000-17721600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr17:17716000-17721600 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr17:17716000-17721600 Strong transcription Fetal Thymus thymus
29 chr17:17716000-17721800 Strong transcription Primary hematopoietic stem cells short term culture blood
30 chr17:17716000-17721800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr17:17716000-17722000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr17:17716000-17722200 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr17:17716000-17722200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr17:17716000-17722200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
35 chr17:17716000-17722600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr17:17716000-17722600 Strong transcription HUVEC blood vessel
37 chr17:17716000-17723000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr17:17716000-17723000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr17:17716000-17723200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr17:17716000-17724400 Strong transcription Fetal Stomach stomach
41 chr17:17716000-17724400 Genic enhancers Right Ventricle heart
42 chr17:17716200-17721200 Strong transcription HUES64 Cell Line embryonic stem cell
43 chr17:17716200-17721200 Strong transcription Colonic Mucosa Colon
44 chr17:17716200-17721200 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr17:17716200-17721600 Strong transcription H1 Cell Line embryonic stem cell
46 chr17:17716200-17721600 Strong transcription Lung lung
47 chr17:17716200-17722400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr17:17716200-17722800 Strong transcription Primary B cells from peripheral blood blood
49 chr17:17716200-17723600 Strong transcription iPS-20b Cell Line embryonic stem cell
50 chr17:17716200-17723800 Genic enhancers Liver Liver

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