Variant report

Variant rs2231385
Chromosome Location chr3:55693187-55693188
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:55691000-55694800 Enhancers GM12878-XiMat blood
2 chr3:55691000-55695800 Enhancers Fetal Brain Male brain
3 chr3:55691600-55694400 Enhancers ES-I3 Cell Line embryonic stem cell
4 chr3:55691800-55693800 Enhancers HUES48 Cell Line embryonic stem cell
5 chr3:55692000-55693400 Enhancers Primary T cells from cord blood blood
6 chr3:55692000-55694400 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr3:55692200-55693200 Enhancers ES-WA7 Cell Line embryonic stem cell
8 chr3:55692200-55693200 Enhancers NHEK skin
9 chr3:55692200-55693400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr3:55692400-55693200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr3:55692400-55693400 Enhancers Esophagus oesophagus
12 chr3:55692400-55693600 Enhancers Fetal Thymus thymus
13 chr3:55692400-55694400 Enhancers H1 Cell Line embryonic stem cell
14 chr3:55692400-55695200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr3:55692600-55693200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:55692600-55693800 Enhancers iPS-18 Cell Line embryonic stem cell
17 chr3:55692600-55694000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr3:55692600-55694000 Enhancers HUES64 Cell Line embryonic stem cell
19 chr3:55692600-55694200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
20 chr3:55692600-55694600 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr3:55692600-55695800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr3:55692800-55693200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:55692800-55693400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
24 chr3:55692800-55693400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
25 chr3:55692800-55693600 Enhancers Fetal Brain Female brain
26 chr3:55692800-55694000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr3:55693000-55693400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr3:55693000-55694000 Enhancers Brain Germinal Matrix brain
29 chr3:55693000-55696600 Weak transcription HMEC breast
30 chr3:55693000-55697400 Weak transcription H9 Cell Line embryonic stem cell

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