Variant report

Variant	rs2233136
Chromosome Location	chr14:71059826-71059827
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:71051977..71055300-chr14:71059343..71060947,3	K562	blood:
2	chr14:71057525..71060066-chr14:71062663..71064760,2	K562	blood:

Variant related genes	Relation type
ENSG00000133997	Chromatin interaction

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10135054	0.85[CEU][hapmap];0.95[EUR][1000 genomes]
rs10144849	0.95[EUR][1000 genomes]
rs55638679	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs55830682	0.83[AMR][1000 genomes]
rs55831916	0.95[EUR][1000 genomes]
rs55844620	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs55861611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs55988558	0.83[AMR][1000 genomes]
rs56118324	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs56284928	0.83[AMR][1000 genomes]
rs56322329	0.95[EUR][1000 genomes]
rs56389452	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs56405439	0.95[EUR][1000 genomes]
rs59480415	0.95[EUR][1000 genomes]
rs66883325	0.95[EUR][1000 genomes]
rs66915556	0.95[EUR][1000 genomes]
rs67358716	0.95[EUR][1000 genomes]
rs7154970	0.85[CEU][hapmap];0.95[EUR][1000 genomes]
rs7160103	0.95[EUR][1000 genomes]
rs72719730	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs72719731	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs72719734	0.83[AMR][1000 genomes]
rs72719735	0.83[AMR][1000 genomes]
rs72719738	0.83[AMR][1000 genomes]
rs72719741	0.83[AMR][1000 genomes]
rs72719743	0.83[AMR][1000 genomes]
rs72719744	0.83[AMR][1000 genomes]
rs72719745	0.83[AMR][1000 genomes]
rs72719746	0.83[AMR][1000 genomes]
rs72719747	0.83[AMR][1000 genomes]
rs72719748	0.83[AMR][1000 genomes]
rs72719750	0.83[AMR][1000 genomes]
rs72719751	0.83[AMR][1000 genomes]
rs72719754	0.83[AMR][1000 genomes]
rs72719757	0.83[AMR][1000 genomes]
rs72719758	0.83[AMR][1000 genomes]
rs72719764	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72719773	0.95[EUR][1000 genomes]
rs72719777	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72719785	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72719791	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71029000-71066000	Weak transcription	Small Intestine	intestine
2	chr14:71030800-71061200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr14:71032600-71061000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr14:71034800-71061200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr14:71042000-71066600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr14:71043600-71060400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr14:71043600-71063400	Strong transcription	Primary B cells from cord blood	blood
8	chr14:71044400-71063600	Strong transcription	Primary T cells from cord blood	blood
9	chr14:71044600-71063400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
10	chr14:71045000-71063400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr14:71045000-71064200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr14:71045200-71063400	Strong transcription	Duodenum Smooth Muscle	Duodenum
13	chr14:71045200-71063600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr14:71045200-71063800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr14:71045200-71064400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr14:71045400-71063000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr14:71045400-71063200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr14:71045400-71063400	Strong transcription	Brain Anterior Caudate	brain
19	chr14:71045400-71063600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
20	chr14:71045400-71063800	Strong transcription	Monocytes-CD14+_RO01746	blood
21	chr14:71045400-71064600	Strong transcription	Primary B cells from peripheral blood	blood
22	chr14:71045600-71063800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr14:71045600-71064600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr14:71045600-71064600	Strong transcription	Primary T cells fromperipheralblood	blood
25	chr14:71045800-71063400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr14:71045800-71063400	Strong transcription	Fetal Thymus	thymus
27	chr14:71045800-71063600	Strong transcription	HUES48 Cell Line	embryonic stem cell
28	chr14:71046200-71064400	Strong transcription	Primary T helper cells fromperipheralblood	blood
29	chr14:71046400-71063400	Strong transcription	HUES6 Cell Line	embryonic stem cell
30	chr14:71046400-71063400	Strong transcription	Placenta	Placenta
31	chr14:71046400-71064800	Strong transcription	Primary T helper cells PMA-I stimulated	--
32	chr14:71046600-71063400	Strong transcription	Liver	Liver
33	chr14:71046600-71063400	Strong transcription	Fetal Lung	lung
34	chr14:71046800-71061800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
35	chr14:71046800-71063200	Strong transcription	Stomach Smooth Muscle	stomach
36	chr14:71046800-71063400	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
37	chr14:71046800-71064600	Strong transcription	HUES64 Cell Line	embryonic stem cell
38	chr14:71047000-71061200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr14:71047000-71063400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
40	chr14:71047000-71063400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr14:71047000-71063400	Strong transcription	Adipose Nuclei	Adipose
42	chr14:71047000-71063400	Strong transcription	Duodenum Mucosa	Duodenum
43	chr14:71047000-71063400	Strong transcription	HSMM	muscle
44	chr14:71047000-71064000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
45	chr14:71047200-71063400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
46	chr14:71047200-71064600	Strong transcription	Rectal Mucosa Donor 31	rectum
47	chr14:71047400-71063200	Strong transcription	Fetal Intestine Large	intestine
48	chr14:71047400-71063400	Strong transcription	Primary neutrophils fromperipheralblood	blood
49	chr14:71047400-71063400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr14:71047400-71063400	Strong transcription	Fetal Muscle Trunk	muscle

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