Variant report

Variant rs2236978
Chromosome Location chr3:50486239-50486240
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50465800-50487000 Weak transcription Fetal Intestine Small intestine
2 chr3:50474000-50487400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr3:50477800-50486400 Enhancers Fetal Muscle Trunk muscle
4 chr3:50479800-50487800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr3:50481200-50486600 Weak transcription Brain Anterior Caudate brain
6 chr3:50481200-50487000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr3:50481200-50487000 Weak transcription Right Ventricle heart
8 chr3:50481400-50487800 Enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr3:50481800-50488200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr3:50482200-50487400 Weak transcription Brain Angular Gyrus brain
11 chr3:50482200-50487400 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr3:50482200-50493400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr3:50483800-50487400 Weak transcription Fetal Muscle Leg muscle
14 chr3:50483800-50488600 Enhancers Lung lung
15 chr3:50484000-50500800 Weak transcription Pancreas Pancrea
16 chr3:50484200-50487200 Enhancers Primary T cells fromperipheralblood blood
17 chr3:50484600-50486400 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr3:50484600-50486600 Weak transcription Spleen Spleen
19 chr3:50484600-50487000 Weak transcription Fetal Stomach stomach
20 chr3:50485000-50487000 Weak transcription Gastric stomach
21 chr3:50485200-50488000 Enhancers Fetal Lung lung
22 chr3:50485200-50488000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr3:50485600-50486600 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr3:50485600-50486800 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr3:50485600-50487200 Enhancers Primary T helper cells PMA-I stimulated --
26 chr3:50485600-50487200 Weak transcription Fetal Intestine Large intestine
27 chr3:50485600-50487200 Weak transcription Stomach Mucosa stomach
28 chr3:50485800-50487000 Weak transcription Primary monocytes fromperipheralblood blood
29 chr3:50485800-50487000 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr3:50485800-50487200 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr3:50486000-50487200 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr3:50486000-50487800 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr3:50486000-50488200 Enhancers Fetal Kidney kidney
34 chr3:50486200-50487400 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr3:50486200-50487400 Weak transcription Pancreatic Islets Pancreatic Islet

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