Variant report

Variant rs9837658
Chromosome Location chr3:50480131-50480132
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50465600-50485800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr3:50465800-50487000 Weak transcription Fetal Intestine Small intestine
3 chr3:50468800-50480200 Weak transcription Brain Inferior Temporal Lobe brain
4 chr3:50473200-50483800 Enhancers Fetal Muscle Leg muscle
5 chr3:50474000-50487400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr3:50475400-50484200 Weak transcription Spleen Spleen
7 chr3:50476200-50480600 Weak transcription Brain Anterior Caudate brain
8 chr3:50476600-50481800 Enhancers Brain Germinal Matrix brain
9 chr3:50477000-50481600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr3:50477600-50480600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr3:50477800-50486400 Enhancers Fetal Muscle Trunk muscle
12 chr3:50478000-50481800 Enhancers Placenta Placenta
13 chr3:50478000-50482800 Enhancers Lung lung
14 chr3:50478600-50481400 Enhancers Fetal Brain Female brain
15 chr3:50478800-50480200 Enhancers Fetal Lung lung
16 chr3:50478800-50481000 Enhancers HSMMtube muscle
17 chr3:50479000-50481400 Enhancers Left Ventricle heart
18 chr3:50479000-50485000 Enhancers Gastric stomach
19 chr3:50479200-50481200 Enhancers Right Ventricle heart
20 chr3:50479600-50481800 Enhancers Fetal Brain Male brain
21 chr3:50479800-50480200 Flanking Active TSS Fetal Heart heart
22 chr3:50479800-50481000 Enhancers Brain Hippocampus Middle brain
23 chr3:50479800-50482800 Enhancers Right Atrium heart
24 chr3:50479800-50487800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr3:50480000-50481200 Bivalent Enhancer Stomach Mucosa stomach
26 chr3:50480000-50482000 Weak transcription Rectal Mucosa Donor 31 rectum

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