Variant report

Variant	rs2237646
Chromosome Location	chr7:103530512-103530513
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10244283	0.85[ASN][1000 genomes]
rs10270041	0.84[AFR][1000 genomes]
rs10953394	0.91[ASN][1000 genomes]
rs12669883	0.95[ASN][1000 genomes]
rs17157063	0.97[ASN][1000 genomes]
rs1877109	0.85[ASN][1000 genomes]
rs2237643	0.91[ASN][1000 genomes]
rs2299393	0.90[ASN][1000 genomes]
rs2299395	0.95[ASN][1000 genomes]
rs3914129	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4440548	0.96[ASN][1000 genomes]
rs9641319	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9656085	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103526800-103531000	Enhancers	K562	blood
2	chr7:103529200-103531200	Enhancers	HepG2	liver
3	chr7:103530400-103530600	Enhancers	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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