Variant report

Variant	rs2237711
Chromosome Location	chr7:116337997-116337998
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:116337299..116338864-chr7:116363264..116364890,2	MCF-7	breast:
2	7:115929516-115931284..7:116329363-116339031	H1-hESC	embryonic stem cell:	embryo
3	7:115847372-115857098..7:116329363-116339031	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000105971	Chromatin interaction
ENSG00000135269	Chromatin interaction
ENSG00000105976	Chromatin interaction

rs_ID	r²[population]
rs38849	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs38853	0.89[ASN][1000 genomes]
rs38856	0.82[ASN][1000 genomes]
rs38857	0.86[CHB][hapmap];0.81[ASN][1000 genomes]

Chromatin state (count:53 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116327000-116340000	Weak transcription	Lung	lung
2	chr7:116327400-116339200	Weak transcription	Fetal Intestine Small	intestine
3	chr7:116328200-116339200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:116328200-116339400	Weak transcription	Pancreas	Pancrea
5	chr7:116328600-116341200	Weak transcription	Fetal Muscle Trunk	muscle
6	chr7:116330600-116342200	Weak transcription	Fetal Lung	lung
7	chr7:116331800-116339200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr7:116332000-116339000	Weak transcription	Left Ventricle	heart
9	chr7:116332000-116339400	Weak transcription	HSMMtube	muscle
10	chr7:116332000-116355800	Weak transcription	Fetal Muscle Leg	muscle
11	chr7:116333600-116346000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr7:116333600-116346600	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr7:116333800-116351800	Weak transcription	Gastric	stomach
14	chr7:116334000-116339200	Weak transcription	NHLF	lung
15	chr7:116334000-116341000	Strong transcription	A549	lung
16	chr7:116334000-116342400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr7:116334000-116344600	Weak transcription	NHDF-Ad	bronchial
18	chr7:116334200-116340200	Weak transcription	Fetal Kidney	kidney
19	chr7:116334200-116341400	Strong transcription	Osteobl	bone
20	chr7:116334200-116344000	Weak transcription	Hela-S3	cervix
21	chr7:116334200-116347000	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr7:116334200-116347200	Weak transcription	Stomach Mucosa	stomach
23	chr7:116335000-116338200	Strong transcription	Muscle Satellite Cultured Cells	--
24	chr7:116335000-116339000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr7:116335000-116341400	Strong transcription	HepG2	liver
26	chr7:116335200-116339400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr7:116335200-116341000	Strong transcription	HMEC	breast
28	chr7:116336200-116339200	Weak transcription	Fetal Stomach	stomach
29	chr7:116336200-116346800	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr7:116336400-116339000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr7:116336600-116338000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr7:116336600-116339600	Enhancers	Skeletal Muscle Male	skeletal muscle
33	chr7:116336600-116345800	Genic enhancers	NHEK	skin
34	chr7:116337000-116338200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr7:116337000-116339200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr7:116337000-116339200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr7:116337000-116339200	Weak transcription	Liver	Liver
38	chr7:116337000-116339600	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr7:116337200-116339000	Weak transcription	Psoas Muscle	Psoas
40	chr7:116337200-116339000	Enhancers	Skeletal Muscle Female	skeletal muscle
41	chr7:116337400-116339200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr7:116337400-116339800	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
43	chr7:116337600-116339600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr7:116337600-116340200	Enhancers	Brain Substantia Nigra	brain
45	chr7:116337600-116341800	Weak transcription	NH-A	brain
46	chr7:116337800-116338000	Enhancers	Brain Angular Gyrus	brain
47	chr7:116337800-116338000	Enhancers	Brain Cingulate Gyrus	brain
48	chr7:116337800-116338000	Enhancers	Right Ventricle	heart
49	chr7:116337800-116338000	Genic enhancers	HSMM	muscle
50	chr7:116337800-116338200	Enhancers	Brain Anterior Caudate	brain

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