Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:72694736..72697580-chr14:72698002..72700652,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11847225	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11851422	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12878303	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12881198	0.80[JPT][hapmap]
rs12891167	0.80[JPT][hapmap]
rs12897241	0.80[JPT][hapmap]
rs17109573	0.80[JPT][hapmap]
rs17109589	0.80[JPT][hapmap]
rs2238219	0.85[CEU][hapmap]
rs2238220	0.80[JPT][hapmap]
rs2238222	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2238225	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2238226	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2238238	0.83[CHB][hapmap]
rs2283399	0.80[JPT][hapmap]
rs35077108	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35529091	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4903001	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4903002	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4903005	0.84[JPT][hapmap]
rs67327215	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7156404	0.85[CEU][hapmap]
rs722561	0.85[CEU][hapmap];0.80[JPT][hapmap]
rs8006974	1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8007128	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8016936	1.00[CHB][hapmap];0.85[JPT][hapmap];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs847246	0.80[JPT][hapmap]
rs847261	0.80[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
3	nsv1041492	chr14:72634606-72768970	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv977614	chr14:72696106-72702781	Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72687800-72700200	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr14:72687800-72705800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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