Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:50208660..50210019-chr10:50369301..50370268,4	MCF-7	breast:
2	chr10:50209070..50209954-chr10:50372326..50373284,5	MCF-7	breast:
3	chr10:50194012..50196648-chr10:50208584..50210645,2	MCF-7	breast:
4	chr10:50209257..50210052-chr10:50272111..50272923,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:8)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895371	chr10:49492075-50232180	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv831866	chr10:50165180-50335276	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	10 gene(s)	inside rSNPs	diseases
3	nsv6620	chr10:50197344-50224635	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50206200-50210400	Enhancers	Duodenum Mucosa	Duodenum
2	chr10:50206200-50211200	Enhancers	Fetal Intestine Small	intestine
3	chr10:50206600-50211000	Enhancers	Fetal Intestine Large	intestine
4	chr10:50208600-50210200	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:50208600-50210600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
6	chr10:50208600-50210800	Enhancers	Right Ventricle	heart
7	chr10:50209000-50211000	Enhancers	Ovary	ovary
8	chr10:50209200-50210000	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr10:50209200-50210200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr10:50209200-50210200	Enhancers	Skeletal Muscle Female	skeletal muscle
11	chr10:50209200-50210400	Enhancers	Fetal Heart	heart
12	chr10:50209200-50210400	Enhancers	Fetal Lung	lung
13	chr10:50209400-50210200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr10:50209400-50210600	Enhancers	Placenta	Placenta
15	chr10:50209600-50210800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr10:50209600-50210800	Enhancers	Spleen	Spleen
17	chr10:50209600-50211000	Enhancers	Left Ventricle	heart
18	chr10:50209800-50210200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr10:50209800-50210200	Bivalent Enhancer	Fetal Stomach	stomach
20	chr10:50209800-50210200	Enhancers	Right Atrium	heart
21	chr10:50209800-50210400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr10:50209800-50210800	Enhancers	Fetal Muscle Leg	muscle

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