Variant report

Variant rs2254504
Chromosome Location chr7:6678561-6678562
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:6676000-6678600 Active TSS A549 lung
2 chr7:6676000-6678600 Active TSS NHLF lung
3 chr7:6677400-6678600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
4 chr7:6677400-6678600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr7:6677400-6678600 Flanking Active TSS Adipose Nuclei Adipose
6 chr7:6677400-6678600 Flanking Active TSS Stomach Smooth Muscle stomach
7 chr7:6677400-6678600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr7:6677600-6678600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
9 chr7:6677600-6678600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
10 chr7:6677600-6678600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
11 chr7:6677600-6678600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr7:6677600-6678600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
13 chr7:6677600-6678800 Flanking Active TSS Fetal Brain Female brain
14 chr7:6677600-6678800 Transcr. at gene 5' and 3' Dnd41 blood
15 chr7:6677600-6679000 Flanking Active TSS Brain Germinal Matrix brain
16 chr7:6677800-6678600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr7:6677800-6678600 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
18 chr7:6677800-6678600 Enhancers Placenta Placenta
19 chr7:6677800-6678600 Enhancers Gastric stomach
20 chr7:6677800-6679200 Enhancers Spleen Spleen
21 chr7:6677800-6679400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr7:6677800-6679400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr7:6678000-6678600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
24 chr7:6678000-6678600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
25 chr7:6678000-6678600 Flanking Active TSS GM12878-XiMat blood
26 chr7:6678000-6678800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr7:6678000-6678800 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr7:6678000-6678800 Enhancers Lung lung
29 chr7:6678000-6678800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
30 chr7:6678000-6679000 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr7:6678000-6679000 Enhancers Primary mononuclear cells fromperipheralblood Blood
32 chr7:6678000-6679200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr7:6678000-6679400 Enhancers Primary T helper 17 cells PMA-I stimulated --
34 chr7:6678000-6679400 Enhancers Left Ventricle heart
35 chr7:6678000-6680600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
36 chr7:6678000-6691600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr7:6678200-6678600 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr7:6678200-6678600 Enhancers Primary B cells from cord blood blood
39 chr7:6678200-6678600 Enhancers Brain Angular Gyrus brain
40 chr7:6678200-6678600 Enhancers Brain Substantia Nigra brain
41 chr7:6678200-6678600 Enhancers Duodenum Mucosa Duodenum
42 chr7:6678200-6678600 Weak transcription Fetal Intestine Small intestine
43 chr7:6678200-6678600 Enhancers Fetal Lung lung
44 chr7:6678200-6678600 Enhancers HUVEC blood vessel
45 chr7:6678200-6678600 Enhancers NHDF-Ad bronchial
46 chr7:6678200-6678800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr7:6678200-6678800 Enhancers Primary T cells from cord blood blood
48 chr7:6678200-6678800 Enhancers Cortex derived primary cultured neurospheres brain
49 chr7:6678200-6678800 Enhancers Liver Liver
50 chr7:6678200-6678800 Enhancers Brain Inferior Temporal Lobe brain

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