The 2.0 version of rSNPBase

Variant report

Variant rs2272250
Chromosome Location chr2:54054040-54054041
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54015600-54054600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:54025800-54062000 Weak transcription Right Ventricle heart
3 chr2:54025800-54085600 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr2:54030400-54063000 Weak transcription Esophagus oesophagus
5 chr2:54040200-54055000 Weak transcription Fetal Heart heart
6 chr2:54041400-54054600 Weak transcription Psoas Muscle Psoas
7 chr2:54041400-54056400 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:54042800-54062200 Weak transcription Fetal Kidney kidney
9 chr2:54046600-54080200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr2:54046600-54080200 Weak transcription NHDF-Ad bronchial
11 chr2:54046800-54054200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr2:54046800-54054200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr2:54046800-54056800 Weak transcription Primary hematopoietic stem cells blood
14 chr2:54046800-54060400 Weak transcription Primary B cells from cord blood blood
15 chr2:54046800-54070800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr2:54046800-54080400 Weak transcription Rectal Smooth Muscle rectum
17 chr2:54047000-54056600 Weak transcription Brain Germinal Matrix brain
18 chr2:54047000-54060600 Weak transcription Primary T cells fromperipheralblood blood
19 chr2:54047000-54061400 Weak transcription Fetal Thymus thymus
20 chr2:54047000-54080200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:54047000-54080200 Weak transcription A549 lung
22 chr2:54047000-54080400 Weak transcription Gastric stomach
23 chr2:54047000-54080400 Weak transcription Pancreas Pancrea
24 chr2:54047000-54080800 Weak transcription Aorta Aorta
25 chr2:54047200-54054200 Weak transcription Left Ventricle heart
26 chr2:54047200-54054600 Weak transcription Lung lung
27 chr2:54047200-54055200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr2:54047200-54056800 Weak transcription HSMMtube muscle
29 chr2:54047200-54059600 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr2:54047200-54061800 Weak transcription Thymus Thymus
31 chr2:54047200-54063000 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr2:54047200-54067600 Weak transcription HSMM muscle
33 chr2:54047200-54070800 Weak transcription Placenta Placenta
34 chr2:54047200-54077000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:54047200-54080000 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr2:54047200-54080200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr2:54047200-54080200 Weak transcription Muscle Satellite Cultured Cells --
38 chr2:54047200-54080200 Weak transcription Fetal Muscle Trunk muscle
39 chr2:54047200-54080400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr2:54047200-54080400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:54047200-54080800 Weak transcription Primary B cells from peripheral blood blood
42 chr2:54047400-54054600 Weak transcription Primary T cells from cord blood blood
43 chr2:54047400-54055800 Weak transcription Fetal Muscle Leg muscle
44 chr2:54047600-54054600 Weak transcription Colon Smooth Muscle Colon
45 chr2:54047600-54058400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:54047600-54080400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr2:54047600-54080800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr2:54047800-54064200 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr2:54048200-54065000 Weak transcription Stomach Smooth Muscle stomach
50 chr2:54050200-54080400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015