Variant report

Variant	rs2274155
Chromosome Location	chr6:33857560-33857561
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs16869745	1.00[EUR][1000 genomes]
rs4711368	1.00[EUR][1000 genomes]
rs4713724	1.00[EUR][1000 genomes]
rs57423367	1.00[EUR][1000 genomes]
rs59880244	1.00[EUR][1000 genomes]
rs732673	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916210	chr6:33804111-34144062	Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33850000-33860400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:33850000-33871800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr6:33855000-33862600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr6:33855200-33860000	Weak transcription	Fetal Intestine Small	intestine
5	chr6:33856200-33857600	Weak transcription	Fetal Intestine Large	intestine
6	chr6:33856200-33857600	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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