Variant report

Variant	rs2276980
Chromosome Location	chr4:128703950-128703951
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RELA	chr4:128703002-128704744	GM12891	blood:	n/a	n/a
2	POLR2A	chr4:128702808-128704715	K562	blood:	n/a	n/a
3	MYC	chr4:128702635-128705037	K562	blood:	n/a	chr4:128702816-128702826 chr4:128702792-128702801
4	SIN3A	chr4:128703361-128704235	GM12878	blood:	n/a	chr4:128704210-128704223
5	MAX	chr4:128702418-128704315	H1-hESC	embryonic stem cell:	n/a	chr4:128702816-128702826 chr4:128702792-128702801
6	MAX	chr4:128702506-128704862	A549	lung:	n/a	chr4:128702816-128702826 chr4:128702792-128702801
7	MBD4	chr4:128703584-128704208	HepG2	liver:	n/a	n/a
8	NRF1	chr4:128703247-128704354	SK-N-SH	brain:	n/a	chr4:128703425-128703439 chr4:128703428-128703442 chr4:128703427-128703438 chr4:128703428-128703439 chr4:128703428-128703437
9	CEBPB	chr4:128703524-128704686	HepG2	liver:	n/a	chr4:128704156-128704169
10	CTCF	chr4:128703939-128704031	Gliobla	brain:	n/a	chr4:128703969-128703982
11	CTCF	chr4:128703940-128704090	GM12864	blood:	n/a	chr4:128703969-128703982
12	SIN3AK20	chr4:128703377-128704201	H1-hESC	embryonic stem cell:	n/a	n/a
13	NFATC1	chr4:128703157-128704362	GM12878	blood:	n/a	n/a
14	BRCA1	chr4:128703299-128705533	Hela-S3	cervix:	n/a	n/a
15	CTCF	chr4:128703927-128703997	Hela-S3	cervix:	n/a	chr4:128703969-128703982
16	POLR2A	chr4:128702813-128704115	Gliobla	brain:	n/a	n/a
17	MAX	chr4:128702451-128704919	A549	lung:	n/a	chr4:128702816-128702826 chr4:128702792-128702801
18	POLR2A	chr4:128702687-128703981	PANC-1	pancreas:	n/a	n/a
19	POLR2A	chr4:128703100-128704101	HEK293	kidney:	n/a	n/a
20	PML	chr4:128703461-128704251	K562	blood:	n/a	n/a
21	MAFK	chr4:128702834-128704636	Hela-S3	cervix:	n/a	chr4:128703344-128703361
22	CUX1	chr4:128703901-128704061	GM12878	blood:	n/a	n/a
23	POLR2A	chr4:128703029-128704669	H1-neurons	neurons:	n/a	n/a
24	POLR2A	chr4:128703082-128704760	HL-60	blood:	n/a	n/a
25	POU2F2	chr4:128703239-128704333	GM12878	blood:	n/a	chr4:128704211-128704223
26	MTA3	chr4:128703373-128704484	GM12878	blood:	n/a	n/a
27	POLR2A	chr4:128702717-128704120	ECC-1	luminal epithelium:	n/a	n/a
28	HA-E2F1	chr4:128702411-128703965	Hela-S3	cervix:	n/a	chr4:128703429-128703438 chr4:128702885-128702894 chr4:128702781-128702790 chr4:128703037-128703047 chr4:128702684-128702694 chr4:128703262-128703274
29	PML	chr4:128703095-128704748	K562	blood:	n/a	n/a
30	BCL11A	chr4:128703506-128704165	GM12878	blood:	n/a	chr4:128703900-128703909
31	MYC	chr4:128702722-128704738	Hela-S3	cervix:	n/a	chr4:128702816-128702826 chr4:128702792-128702801
32	SIN3A	chr4:128702736-128704693	H1-hESC	embryonic stem cell:	n/a	chr4:128704210-128704223 chr4:128702862-128702875
33	POLR2A	chr4:128703158-128703972	K562	blood:	n/a	n/a
34	SPI1	chr4:128703870-128704140	K562	blood:	n/a	n/a
35	POLR2A	chr4:128703260-128704356	GM12892	blood:	n/a	n/a
36	EP300	chr4:128702917-128704463	GM12878	blood:	n/a	chr4:128704355-128704368 chr4:128703033-128703042 chr4:128703038-128703047
37	ATF2	chr4:128703223-128704431	GM12878	blood:	n/a	n/a
38	RCOR1	chr4:128702601-128704558	GM12878	blood:	n/a	n/a
39	POLR2A	chr4:128702812-128704470	GM12878	blood:	n/a	n/a
40	JUND	chr4:128702904-128704780	K562	blood:	n/a	chr4:128704730-128704742 chr4:128703244-128703253
41	TAF1	chr4:128702719-128704143	H1-hESC	embryonic stem cell:	n/a	n/a
42	MAX	chr4:128702415-128704710	ECC-1	luminal epithelium:	n/a	chr4:128702816-128702826 chr4:128702792-128702801
43	MAX	chr4:128702441-128704339	GM12878	blood:	n/a	chr4:128702816-128702826 chr4:128702792-128702801
44	SIN3AK20	chr4:128702721-128704233	PANC-1	pancreas:	n/a	n/a
45	RCOR1	chr4:128702696-128704683	Hela-S3	cervix:	n/a	n/a
46	POLR2A	chr4:128703333-128704711	GM12891	blood:	n/a	n/a
47	ZNF143	chr4:128703886-128704153	Hela-S3	cervix:	n/a	n/a
48	EP300	chr4:128702030-128705461	SK-N-SH	brain:	n/a	chr4:128702275-128702285 chr4:128702355-128702369 chr4:128704355-128704368 chr4:128702321-128702335 chr4:128703033-128703042 chr4:128703038-128703047
49	CTCF	chr4:128703920-128704070	SAEC	small airway:	n/a	chr4:128703969-128703982
50	MAX	chr4:128702734-128704568	A549	lung:	n/a	chr4:128702816-128702826 chr4:128702792-128702801

No.	Distal block	Cell Line	Cell type
1	chr4:128702580..128705894-chr4:128810025..128813296,3	K562	blood:
2	chr4:128703531..128705249-chr4:130014655..130017577,2	K562	blood:
3	chr4:128701934..128705815-chr4:128979420..128984468,5	K562	blood:
4	chr4:128701663..128704492-chr4:128800560..128804784,7	MCF-7	breast:
5	chr4:128702203..128705505-chr4:128800773..128804170,4	MCF-7	breast:
6	chr19:41222374..41223187-chr4:128703821..128704556,2	Hela-S3	cervix:
7	chr4:128701212..128704782-chr4:128885853..128888301,4	MCF-7	breast:
8	chr4:128702304..128707255-chr4:128884841..128889595,9	K562	blood:
9	chr4:128702147..128704685-chr4:128980177..128982661,2	MCF-7	breast:
10	chr4:128701934..128705815-chr4:128979420..128985014,7	K562	blood:
11	chr11:47206754..47207663-chr4:128703485..128704269,2	Hela-S3	cervix:
12	chr4:128702265..128705282-chr4:128884841..128889213,7	K562	blood:
13	chr4:128701911..128705042-chr4:128800160..128804699,6	K562	blood:

Variant related genes	Relation type
HSPA4L	TF binding region
ENSG00000086544	Chromatin interaction
ENSG00000151470	Chromatin interaction
ENSG00000123815	Chromatin interaction
ENSG00000251821	Chromatin interaction
ENSG00000164074	Chromatin interaction
ENSG00000138709	Chromatin interaction
ENSG00000151466	Chromatin interaction
ENSG00000142731	Chromatin interaction
ENSG00000164073	Chromatin interaction
ENSG00000165912	Chromatin interaction

Extended variants
information (count: 145 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:129)

rs_ID	r²[population]
rs10493145	1.00[CEU][hapmap];0.84[CHB][hapmap];0.94[CHD][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10493146	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10493148	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11935472	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11940642	1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs11942726	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs1355927	0.90[EUR][1000 genomes]
rs1380155	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1514313	0.90[EUR][1000 genomes]
rs1514314	0.90[EUR][1000 genomes]
rs1514315	0.90[EUR][1000 genomes]
rs16997978	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[ASN][1000 genomes]
rs17012525	0.91[EUR][1000 genomes]
rs17012586	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17012601	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17012634	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17012654	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17012683	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17012687	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17012695	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17012703	0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17012708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17012710	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17012727	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs17012743	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17012750	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs17012788	1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs17012836	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs1824332	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs1841156	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1841157	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1903106	1.00[EUR][1000 genomes]
rs2007243	0.90[EUR][1000 genomes]
rs2276898	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs2276900	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs2279071	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2391185	1.00[EUR][1000 genomes]
rs28570426	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2893227	1.00[EUR][1000 genomes]
rs3214037	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs35147318	1.00[EUR][1000 genomes]
rs35858752	1.00[EUR][1000 genomes]
rs3733319	0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap]
rs4422427	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4426798	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs4431238	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs4456965	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4508904	0.82[ASN][1000 genomes]
rs4513584	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4535346	1.00[CEU][hapmap];0.84[CHB][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs4590052	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4618331	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs56250604	0.81[ASN][1000 genomes]
rs56763029	1.00[EUR][1000 genomes]
rs56893530	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57499646	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58486324	1.00[EUR][1000 genomes]
rs60404814	1.00[EUR][1000 genomes]
rs60553863	1.00[EUR][1000 genomes]
rs60666303	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs60803593	1.00[EUR][1000 genomes]
rs6850549	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.80[ASN][1000 genomes]
rs6850726	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap]
rs72616920	1.00[EUR][1000 genomes]
rs72616921	1.00[EUR][1000 genomes]
rs72616922	1.00[EUR][1000 genomes]
rs72616923	1.00[EUR][1000 genomes]
rs72616924	1.00[EUR][1000 genomes]
rs72616925	1.00[EUR][1000 genomes]
rs72616926	1.00[EUR][1000 genomes]
rs72616927	1.00[EUR][1000 genomes]
rs72616928	1.00[EUR][1000 genomes]
rs72616929	1.00[EUR][1000 genomes]
rs72616930	1.00[EUR][1000 genomes]
rs72616931	1.00[EUR][1000 genomes]
rs72616932	1.00[EUR][1000 genomes]
rs72616933	1.00[EUR][1000 genomes]
rs72616934	1.00[EUR][1000 genomes]
rs72616935	1.00[EUR][1000 genomes]
rs72616936	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72616937	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72616938	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72616939	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72616940	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72616941	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72616942	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72616943	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72616947	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72616948	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72616949	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72616950	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72616951	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72616952	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72616953	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72616954	0.90[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs72616955	0.81[ASN][1000 genomes]
rs72616956	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72616957	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72616958	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72616959	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72616960	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72616961	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72616963	0.81[ASN][1000 genomes]
rs72621863	0.90[EUR][1000 genomes]
rs72621865	0.90[EUR][1000 genomes]
rs72621866	0.90[EUR][1000 genomes]
rs72621867	0.90[EUR][1000 genomes]
rs72621868	0.90[EUR][1000 genomes]
rs72621869	0.90[EUR][1000 genomes]
rs72621870	0.82[EUR][1000 genomes]
rs72621871	0.90[EUR][1000 genomes]
rs72621886	1.00[EUR][1000 genomes]
rs72621891	1.00[EUR][1000 genomes]
rs72621892	1.00[EUR][1000 genomes]
rs72621893	1.00[EUR][1000 genomes]
rs72621894	1.00[EUR][1000 genomes]
rs72621895	1.00[EUR][1000 genomes]
rs72621896	1.00[EUR][1000 genomes]
rs72621897	1.00[EUR][1000 genomes]
rs72621898	1.00[EUR][1000 genomes]
rs72621899	1.00[EUR][1000 genomes]
rs72621900	1.00[EUR][1000 genomes]
rs72621901	1.00[EUR][1000 genomes]
rs72621902	1.00[EUR][1000 genomes]
rs72624503	1.00[EUR][1000 genomes]
rs72624504	1.00[EUR][1000 genomes]
rs72624505	1.00[EUR][1000 genomes]
rs7439365	1.00[CEU][hapmap];0.95[CHB][hapmap];0.82[CHD][hapmap];0.90[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7684815	0.87[AMR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879915	chr4:128167093-129150590	Strong transcription Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv817326	chr4:128292216-128915201	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	nsv879917	chr4:128478408-128841252	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv879921	chr4:128554404-128766074	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
5	nsv879922	chr4:128554404-128901402	Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
6	nsv879923	chr4:128554404-129068179	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
7	esv1801492	chr4:128566686-128934513	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
8	esv1792644	chr4:128566686-129133826	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
9	esv1795770	chr4:128566686-129145581	Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
10	esv1793579	chr4:128577439-128871309	Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
11	esv1792152	chr4:128585215-128752829	Strong transcription Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
12	nsv830057	chr4:128591288-128788777	Strong transcription Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
13	nsv879926	chr4:128652227-128766074	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
14	esv3431515	chr4:128657260-128932577	Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
15	nsv879927	chr4:128668850-128766074	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
16	nsv437935	chr4:128689936-128703950	Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	17 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128702200-128706800	Active TSS	Breast Myoepithelial Primary Cells	Breast
2	chr4:128702400-128704600	Active TSS	Fetal Kidney	kidney
3	chr4:128702400-128704800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
4	chr4:128702400-128704800	Active TSS	Colonic Mucosa	Colon
5	chr4:128702400-128705000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
6	chr4:128702400-128705000	Bivalent/Poised TSS	Brain Germinal Matrix	brain
7	chr4:128702400-128705000	Active TSS	Fetal Brain Male	brain
8	chr4:128702400-128705800	Active TSS	Brain Anterior Caudate	brain
9	chr4:128702400-128706000	Active TSS	Brain Angular Gyrus	brain
10	chr4:128702400-128706000	Active TSS	Brain Hippocampus Middle	brain
11	chr4:128702400-128706000	Active TSS	Brain Inferior Temporal Lobe	brain
12	chr4:128702400-128706000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
13	chr4:128702400-128706000	Active TSS	Stomach Smooth Muscle	stomach
14	chr4:128702600-128704400	Active TSS	Fetal Brain Female	brain
15	chr4:128702600-128704400	Active TSS	Placenta Amnion	Placenta Amnion
16	chr4:128702600-128704600	Active TSS	Brain Cingulate Gyrus	brain
17	chr4:128702600-128704800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr4:128702600-128704800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
19	chr4:128702600-128704800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr4:128702600-128704800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr4:128702600-128704800	Active TSS	Psoas Muscle	Psoas
22	chr4:128702600-128704800	Active TSS	Rectal Smooth Muscle	rectum
23	chr4:128702600-128705000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
24	chr4:128702600-128705600	Active TSS	A549	lung
25	chr4:128702600-128705800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr4:128702600-128706200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr4:128702800-128704000	Active TSS	H9 Cell Line	embryonic stem cell
28	chr4:128702800-128704000	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr4:128702800-128704200	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr4:128702800-128704200	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
31	chr4:128702800-128704200	Active TSS	HUVEC	blood vessel
32	chr4:128702800-128704400	Flanking Active TSS	Primary hematopoietic stem cells	blood
33	chr4:128702800-128704400	Active TSS	Fetal Lung	lung
34	chr4:128702800-128704600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
35	chr4:128702800-128704600	Bivalent/Poised TSS	Fetal Stomach	stomach
36	chr4:128702800-128704600	Active TSS	Gastric	stomach
37	chr4:128702800-128704600	Active TSS	Stomach Mucosa	stomach
38	chr4:128702800-128704800	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
39	chr4:128702800-128704800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
40	chr4:128702800-128704800	Active TSS	Duodenum Mucosa	Duodenum
41	chr4:128702800-128704800	Bivalent/Poised TSS	Fetal Intestine Small	intestine
42	chr4:128702800-128704800	Active TSS	Ovary	ovary
43	chr4:128702800-128704800	Active TSS	Right Atrium	heart
44	chr4:128702800-128704800	Active TSS	Right Ventricle	heart
45	chr4:128702800-128705000	Active TSS	Colon Smooth Muscle	Colon
46	chr4:128702800-128705200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr4:128702800-128705200	Active TSS	NHDF-Ad	bronchial
48	chr4:128702800-128705600	Active TSS	Duodenum Smooth Muscle	Duodenum
49	chr4:128702800-128705800	Active TSS	Aorta	Aorta
50	chr4:128702800-128705800	Active TSS	Pancreatic Islets	Pancreatic Islet

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