Variant report

Variant rs4590052
Chromosome Location chr4:128638619-128638620
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:128554600-128644800 Weak transcription Lung lung
2 chr4:128566600-128644600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr4:128597000-128651600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr4:128608400-128643800 Weak transcription Right Ventricle heart
5 chr4:128615200-128642000 Weak transcription Brain Hippocampus Middle brain
6 chr4:128615200-128648800 Weak transcription Fetal Kidney kidney
7 chr4:128616200-128646200 Weak transcription Colon Smooth Muscle Colon
8 chr4:128617000-128643400 Weak transcription Fetal Intestine Small intestine
9 chr4:128628200-128640400 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr4:128628200-128641400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr4:128628200-128645600 Weak transcription Brain Substantia Nigra brain
12 chr4:128628200-128645800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr4:128628400-128639800 Weak transcription Pancreas Pancrea
14 chr4:128628400-128643800 Weak transcription Fetal Muscle Trunk muscle
15 chr4:128629400-128645400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr4:128629800-128640000 Weak transcription Brain Angular Gyrus brain
17 chr4:128630600-128641400 Weak transcription Gastric stomach
18 chr4:128630600-128643000 Weak transcription Stomach Smooth Muscle stomach
19 chr4:128630600-128643400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr4:128630600-128643400 Weak transcription Brain Germinal Matrix brain
21 chr4:128630600-128643400 Weak transcription Brain Inferior Temporal Lobe brain
22 chr4:128630800-128645400 Weak transcription Fetal Intestine Large intestine
23 chr4:128632800-128640000 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr4:128633000-128639800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr4:128633000-128643400 Weak transcription Fetal Stomach stomach
26 chr4:128633000-128644800 Weak transcription Adipose Nuclei Adipose
27 chr4:128633000-128645600 Weak transcription Fetal Muscle Leg muscle
28 chr4:128633200-128645400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr4:128633200-128646200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr4:128633400-128640000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr4:128633800-128647800 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr4:128634000-128643600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr4:128634200-128641000 Weak transcription Fetal Brain Female brain
34 chr4:128634200-128641600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr4:128634200-128649000 Weak transcription Left Ventricle heart
36 chr4:128634400-128643400 Weak transcription Aorta Aorta
37 chr4:128634400-128644000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr4:128635600-128639000 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr4:128635600-128639600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr4:128637800-128638800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr4:128638000-128639000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr4:128638200-128639200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr4:128638400-128638800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr4:128638400-128639200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr4:128638400-128643000 Weak transcription Ovary ovary
46 chr4:128638400-128645600 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr4:128638600-128639000 Weak transcription Brain Cingulate Gyrus brain
48 chr4:128638600-128640200 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr4:128638600-128641400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr4:128638600-128643000 Weak transcription Fetal Lung lung

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