Variant report

Variant rs2282542
Chromosome Location chr18:13056682-13056683
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13018600-13117400 Weak transcription Stomach Mucosa stomach
2 chr18:13041600-13063600 Strong transcription Primary T helper cells fromperipheralblood blood
3 chr18:13041800-13058400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr18:13041800-13064400 Strong transcription iPS-20b Cell Line embryonic stem cell
5 chr18:13043200-13058400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr18:13043200-13058600 Weak transcription Fetal Heart heart
7 chr18:13043200-13077800 Strong transcription Dnd41 blood
8 chr18:13045400-13063800 Strong transcription Fetal Thymus thymus
9 chr18:13045600-13062400 Strong transcription HUES64 Cell Line embryonic stem cell
10 chr18:13045600-13063200 Strong transcription HUES48 Cell Line embryonic stem cell
11 chr18:13045800-13057000 Strong transcription A549 lung
12 chr18:13045800-13062400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr18:13045800-13063800 Strong transcription Duodenum Mucosa Duodenum
14 chr18:13046000-13057600 Strong transcription Adipose Nuclei Adipose
15 chr18:13046000-13058200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr18:13046000-13060600 Strong transcription Skeletal Muscle Female skeletal muscle
17 chr18:13046000-13062200 Strong transcription HUES6 Cell Line embryonic stem cell
18 chr18:13046000-13062200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr18:13046000-13062200 Strong transcription Thymus Thymus
20 chr18:13046000-13062400 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr18:13046000-13062400 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr18:13046000-13062400 Strong transcription Fetal Intestine Large intestine
23 chr18:13046000-13062400 Strong transcription Fetal Muscle Leg muscle
24 chr18:13046000-13062400 Strong transcription Sigmoid Colon Sigmoid Colon
25 chr18:13046000-13063400 Strong transcription Duodenum Smooth Muscle Duodenum
26 chr18:13046000-13063800 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr18:13046000-13063800 Strong transcription Rectal Mucosa Donor 31 rectum
28 chr18:13046000-13078600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr18:13046800-13062400 Strong transcription iPS-18 Cell Line embryonic stem cell
30 chr18:13047200-13062200 Strong transcription Liver Liver
31 chr18:13048000-13058800 Strong transcription Rectal Smooth Muscle rectum
32 chr18:13048200-13056800 Strong transcription Muscle Satellite Cultured Cells --
33 chr18:13048200-13057200 Strong transcription Brain Cingulate Gyrus brain
34 chr18:13048200-13057800 Strong transcription Osteobl bone
35 chr18:13048200-13095600 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr18:13048400-13057200 Strong transcription NH-A brain
37 chr18:13048400-13058400 Strong transcription Left Ventricle heart
38 chr18:13048600-13060600 Strong transcription Hela-S3 cervix
39 chr18:13048600-13062000 Strong transcription NHDF-Ad bronchial
40 chr18:13048600-13062200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr18:13048800-13058000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr18:13049000-13070400 Weak transcription Psoas Muscle Psoas
43 chr18:13049600-13059000 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr18:13049600-13061600 Strong transcription Fetal Stomach stomach
45 chr18:13049800-13062800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr18:13049800-13068000 Weak transcription Small Intestine intestine
47 chr18:13050600-13062600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr18:13050800-13060400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr18:13050800-13061400 Strong transcription Fetal Intestine Small intestine
50 chr18:13050800-13062400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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