Variant report

Variant rs2288933
Chromosome Location chr19:39972263-39972264
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39970400-39972600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:39970600-39972400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
3 chr19:39970600-39972600 Flanking Active TSS Primary hematopoietic stem cells blood
4 chr19:39970800-39972400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
5 chr19:39970800-39972600 Active TSS iPS-15b Cell Line embryonic stem cell
6 chr19:39970800-39972600 Flanking Active TSS Primary B cells from cord blood blood
7 chr19:39970800-39972600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
8 chr19:39970800-39972600 Active TSS Pancreatic Islets Pancreatic Islet
9 chr19:39971000-39972400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr19:39971000-39972400 Active TSS Aorta Aorta
11 chr19:39971000-39972400 Active TSS HSMM muscle
12 chr19:39971000-39972600 Active TSS H9 Cell Line embryonic stem cell
13 chr19:39971000-39973000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr19:39971200-39972400 Active TSS iPS-18 Cell Line embryonic stem cell
15 chr19:39971200-39972400 Active TSS A549 lung
16 chr19:39971200-39972600 Active TSS ES-I3 Cell Line embryonic stem cell
17 chr19:39971200-39972600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr19:39971200-39972600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr19:39971200-39972600 Active TSS HUES48 Cell Line embryonic stem cell
20 chr19:39971200-39972600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
21 chr19:39971200-39973000 Active TSS HUES64 Cell Line embryonic stem cell
22 chr19:39971400-39972600 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
23 chr19:39971400-39973000 Active TSS HUES6 Cell Line embryonic stem cell
24 chr19:39971600-39972400 Flanking Active TSS Primary monocytes fromperipheralblood blood
25 chr19:39971600-39972400 Bivalent/Poised TSS HepG2 liver
26 chr19:39971600-39972600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
27 chr19:39971600-39972800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr19:39971600-39972800 Flanking Active TSS Colonic Mucosa Colon
29 chr19:39971600-39973000 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
30 chr19:39971800-39972400 Flanking Active TSS Primary B cells from peripheral blood blood
31 chr19:39971800-39972400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
32 chr19:39971800-39972400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
33 chr19:39971800-39972400 Flanking Active TSS Placenta Placenta
34 chr19:39971800-39972400 Flanking Active TSS Spleen Spleen
35 chr19:39971800-39972600 Flanking Active TSS Primary T cells from cord blood blood
36 chr19:39971800-39972600 Flanking Active TSS Primary T cells fromperipheralblood blood
37 chr19:39971800-39972600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
38 chr19:39971800-39972600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
39 chr19:39971800-39972600 Flanking Active TSS Adipose Nuclei Adipose
40 chr19:39971800-39972600 Flanking Active TSS Brain Anterior Caudate brain
41 chr19:39971800-39972600 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
42 chr19:39971800-39972600 Flanking Active TSS Fetal Muscle Trunk muscle
43 chr19:39971800-39972600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
44 chr19:39971800-39972800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr19:39971800-39972800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
46 chr19:39971800-39972800 Flanking Active TSS Liver Liver
47 chr19:39971800-39972800 Flanking Active TSS Duodenum Mucosa Duodenum
48 chr19:39971800-39972800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
49 chr19:39971800-39972800 Flanking Active TSS Stomach Smooth Muscle stomach
50 chr19:39972000-39972400 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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