Variant report

Variant	rs4390710
Chromosome Location	chr19:39931031-39931032
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:183)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:183 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr19:39930980-39931130	AoAF	blood vessel:	n/a	n/a
2	CTCF	chr19:39930996-39931071	ProgFib	skin:	n/a	n/a
3	CTCF	chr19:39930974-39931104	GM13976	blood:	n/a	n/a
4	CTCF	chr19:39931000-39931150	HCT-116	colon:	n/a	n/a
5	CTCF	chr19:39930960-39931110	Caco-2	colon:	n/a	n/a
6	CTCF	chr19:39930940-39931090	HFF	foreskin:	n/a	n/a
7	RAD21	chr19:39930885-39931206	SK-N-SH_RA	brain:	n/a	n/a
8	CTCF	chr19:39930980-39931130	HRE	kidney:	n/a	n/a
9	CTCF	chr19:39930298-39932492	A549	lung:	n/a	n/a
10	CTCF	chr19:39930861-39931147	A549	lung:	n/a	n/a
11	RAD21	chr19:39930909-39931125	K562	blood:	n/a	n/a
12	CTCF	chr19:39930922-39931171	Hela-S3	cervix:	n/a	n/a
13	RAD21	chr19:39930925-39931196	SK-N-SH_RA	brain:	n/a	n/a
14	CTCF	chr19:39930940-39931126	Gliobla	brain:	n/a	n/a
15	RAD21	chr19:39930288-39931446	SK-N-SH	brain:	n/a	n/a
16	MAZ	chr19:39931007-39931140	K562	blood:	n/a	n/a
17	CTCF	chr19:39931020-39931170	BE2_C	brain:	n/a	n/a
18	CTCF	chr19:39931020-39931170	HCM	heart:	n/a	n/a
19	CTCF	chr19:39930980-39931130	HVMF	connective:	n/a	n/a
20	CTCF	chr19:39930940-39931090	HCPEpiC	choroid plexus:	n/a	n/a
21	TBL1XR1	chr19:39930908-39931226	GM12878	blood:	n/a	n/a
22	POLR2A	chr19:39930912-39931148	HepG2	liver:	n/a	n/a
23	CTCF	chr19:39930980-39931130	AG04449	skin:	n/a	n/a
24	CTCF	chr19:39930940-39931090	HL-60	blood:	n/a	n/a
25	CTCF	chr19:39930835-39931254	A549	lung:	n/a	n/a
26	CTCF	chr19:39930940-39931090	NHEK	skin:	n/a	n/a
27	CTCF	chr19:39930960-39931110	AoAF	blood vessel:	n/a	n/a
28	RAD21	chr19:39930855-39931278	Hela-S3	cervix:	n/a	n/a
29	CTCF	chr19:39930980-39931130	AG10803	skin:	n/a	n/a
30	MYC	chr19:39930874-39931299	MCF10A-Er-Src	breast:	n/a	n/a
31	RAD21	chr19:39930851-39931297	MCF-7	breast:	n/a	n/a
32	POLR2A	chr19:39886400-39939626	PANC-1	pancreas:	n/a	n/a
33	CTCF	chr19:39930960-39931110	GM12874	blood:	n/a	n/a
34	CTCF	chr19:39930967-39931114	HepG2	liver:	n/a	n/a
35	CTCF	chr19:39930969-39931142	Pancreas_OC	pancreas:	n/a	n/a
36	CTCF	chr19:39931000-39931150	AG09319	gingival:	n/a	n/a
37	CTCF	chr19:39930940-39931090	GM12871	blood:	n/a	n/a
38	CTCF	chr19:39930980-39931130	SAEC	small airway:	n/a	n/a
39	CTCF	chr19:39930940-39931090	NHDF-neo	bronchial:	n/a	n/a
40	ZNF143	chr19:39930899-39931229	GM12878	blood:	n/a	n/a
41	SMC3	chr19:39930914-39931207	K562	blood:	n/a	n/a
42	RAD21	chr19:39930863-39931299	IMR90	lung:	n/a	n/a
43	CTCF	chr19:39930980-39931130	HPAF	blood vessel:	n/a	n/a
44	RAD21	chr19:39930701-39931375	HCT-116	colon:	n/a	n/a
45	CTCF	chr19:39930960-39931110	GM12865	blood:	n/a	n/a
46	RAD21	chr19:39930797-39931336	A549	lung:	n/a	n/a
47	CTCF	chr19:39930980-39931130	GM12875	blood:	n/a	n/a
48	CTCF	chr19:39930958-39931150	GM10266	blood:	n/a	n/a
49	BHLHE40	chr19:39930936-39931282	K562	blood:	n/a	n/a
50	CTCF	chr19:39930920-39931070	GM12872	blood:	n/a	n/a

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:39930044..39931944-chr19:39980921..39983797,2	MCF-7	breast:
2	chr19:39930639..39932223-chr19:40029894..40032497,2	MCF-7	breast:
3	chr19:39930627..39931572-chr19:40023181..40024237,5	K562	blood:
4	chr19:39930777..39932408-chr19:40023425..40025081,2	K562	blood:
5	chr19:39931001..39933171-chr19:40029480..40031756,2	MCF-7	breast:
6	chr19:39930372..39932549-chr19:39934536..39937097,4	K562	blood:
7	chr19:39930426..39932115-chr19:39937018..39938757,2	MCF-7	breast:

No data

Variant related genes	Relation type
SUPT5H	TF binding region
RPS16	TF binding region
ENSG00000176401	Chromatin interaction
ENSG00000105197	Chromatin interaction
ENSG00000176396	Chromatin interaction
ENSG00000196235	Chromatin interaction

Extended variants
information (count: 84 )
Associated
traits (count: 7 )

rSNPs within LD-proxies of this variant (count:78)

rs_ID	r²[population]
rs10412931	0.80[ASW][hapmap];0.85[CEU][hapmap];0.91[GIH][hapmap];0.87[MEX][hapmap];0.89[TSI][hapmap]
rs10423537	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10424217	0.86[EUR][1000 genomes]
rs1110627	0.80[ASW][hapmap];0.89[CEU][hapmap];0.91[GIH][hapmap];0.87[MEX][hapmap];0.91[TSI][hapmap];0.80[EUR][1000 genomes]
rs1130180	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12609112	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12978920	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12978954	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12979605	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12983040	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1529732	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1560730	0.96[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.84[LWK][hapmap];0.96[MEX][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17626	0.95[CHB][hapmap];0.87[ASN][1000 genomes]
rs17628	0.87[ASN][1000 genomes]
rs1865091	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1865092	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1932	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap];0.92[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2009970	0.86[ASW][hapmap];0.96[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.96[MKK][hapmap];0.93[TSI][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2060270	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2060271	0.96[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2060272	0.81[EUR][1000 genomes]
rs2116932	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2288933	0.86[ASW][hapmap];0.96[CEU][hapmap];0.86[CHB][hapmap];0.91[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2288934	0.96[CEU][hapmap];0.86[CHB][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2304219	0.96[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2304221	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2353678	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2353679	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs251855	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];0.95[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs251856	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs251857	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];0.95[GIH][hapmap];0.86[JPT][hapmap];0.81[LWK][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs251858	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs251859	1.00[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs251860	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28528765	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28637729	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28649498	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs31725	0.85[GIH][hapmap]
rs31726	0.84[CHD][hapmap];0.81[TSI][hapmap]
rs31727	0.96[CEU][hapmap];0.82[CHB][hapmap];0.84[CHD][hapmap];0.89[GIH][hapmap];0.91[MEX][hapmap];0.89[TSI][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs31728	0.96[CEU][hapmap];0.86[CHB][hapmap];0.80[JPT][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34918990	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35647910	0.88[EUR][1000 genomes]
rs4802026	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4803237	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4803240	0.96[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4803241	0.82[JPT][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4803242	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4803245	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4803246	0.86[ASW][hapmap];0.96[CEU][hapmap];0.86[CHB][hapmap];0.86[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.89[TSI][hapmap];0.86[EUR][1000 genomes]
rs4803247	0.86[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];0.84[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs480595	0.87[ASN][1000 genomes]
rs480656	0.87[ASN][1000 genomes]
rs481421	0.95[CHB][hapmap];0.93[CHD][hapmap];0.87[ASN][1000 genomes]
rs504017	0.88[ASN][1000 genomes]
rs530411	1.00[CHB][hapmap];0.95[CHD][hapmap];0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs564577	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap]
rs566130	1.00[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59007555	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs640000	0.87[ASN][1000 genomes]
rs6508862	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6508863	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6508864	0.87[EUR][1000 genomes]
rs6508865	0.84[EUR][1000 genomes]
rs651601	0.95[CHB][hapmap];0.95[CHD][hapmap];0.86[ASN][1000 genomes]
rs686956	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7251384	0.86[EUR][1000 genomes]
rs7251652	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7255253	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7257526	0.80[ASW][hapmap];0.87[MEX][hapmap];0.82[TSI][hapmap]
rs73035416	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73549933	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8107194	0.86[ASW][hapmap];0.96[CEU][hapmap];0.91[CHB][hapmap];0.88[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.94[MKK][hapmap];0.93[TSI][hapmap];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8107647	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8110134	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.82[YRI][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8110716	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8111260	0.86[EUR][1000 genomes]
rs878754	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870133	chr19:39822160-39938468	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	233 gene(s)	inside rSNPs	diseases
2	nsv911685	chr19:39888449-39948779	Weak transcription Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	222 gene(s)	inside rSNPs	diseases
3	nsv911689	chr19:39903088-40021759	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
4	nsv911690	chr19:39903088-40046863	Weak transcription Bivalent Enhancer Strong transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
5	nsv523856	chr19:39913558-39997472	Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
6	esv1791966	chr19:39921479-39954931	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases

mRNA abundance (count:7)

SNP	Gene	Cis/trans	Tissue	Source
rs4390710	NUMBL	cis	parietal	SCAN
rs4390710	RPS16	cis	Heart Left Ventricle	GTEx
rs4390710	RPS16	cis	lymphoblastoid	seeQTL
rs4390710	RPS16	Cis_1M	lymphoblastoid	RTeQTL
rs4390710	EXOSC5	cis	cerebellum	SCAN
rs4390710	B3GNT8	cis	parietal	SCAN
rs4390710	BCAM	cis	parietal	SCAN

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39926600-39935200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr19:39927400-39935200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr19:39927400-39935200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr19:39927400-39935200	Weak transcription	Gastric	stomach
5	chr19:39927400-39935200	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr19:39927600-39932000	Enhancers	A549	lung
7	chr19:39927600-39934800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr19:39927600-39935000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr19:39927600-39935000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr19:39927600-39935000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr19:39927600-39935000	Weak transcription	Rectal Smooth Muscle	rectum
12	chr19:39927600-39935000	Weak transcription	HMEC	breast
13	chr19:39927600-39935200	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr19:39927600-39935200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
15	chr19:39927600-39935200	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr19:39927600-39935200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
17	chr19:39927600-39935200	Weak transcription	Brain Anterior Caudate	brain
18	chr19:39927600-39935200	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr19:39927600-39935200	Weak transcription	Duodenum Smooth Muscle	Duodenum
20	chr19:39927600-39935200	Weak transcription	Fetal Kidney	kidney
21	chr19:39927600-39935200	Weak transcription	HSMMtube	muscle
22	chr19:39927600-39935200	Weak transcription	NHLF	lung
23	chr19:39927800-39931200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr19:39928600-39935000	Weak transcription	Fetal Intestine Small	intestine
25	chr19:39929200-39932000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr19:39929200-39932200	Enhancers	HepG2	liver
27	chr19:39929400-39931200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr19:39929400-39935000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr19:39929400-39935000	Weak transcription	Muscle Satellite Cultured Cells	--
30	chr19:39929800-39934000	Weak transcription	Placenta	Placenta
31	chr19:39929800-39935000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr19:39929800-39935000	Weak transcription	NHEK	skin
33	chr19:39930000-39931400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr19:39930200-39932000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr19:39930400-39932400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr19:39930600-39931200	Enhancers	GM12878-XiMat	blood
37	chr19:39930600-39932000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr19:39930600-39935000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr19:39930800-39931200	Enhancers	Brain Angular Gyrus	brain
40	chr19:39930800-39931400	Enhancers	Brain Hippocampus Middle	brain
41	chr19:39930800-39931400	Enhancers	Duodenum Mucosa	Duodenum
42	chr19:39931000-39931200	Flanking Active TSS	Hela-S3	cervix
43	chr19:39931000-39931400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr19:39931000-39931400	Enhancers	Primary B cells from cord blood	blood
45	chr19:39931000-39931400	Enhancers	Primary B cells from peripheral blood	blood
46	chr19:39931000-39931400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr19:39931000-39931400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr19:39931000-39931400	Enhancers	Rectal Mucosa Donor 29	rectum
49	chr19:39931000-39931600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
50	chr19:39931000-39931800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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