Variant report

Variant rs2116932
Chromosome Location chr19:39936693-39936694
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39934800-39937000 Active TSS Breast Myoepithelial Primary Cells Breast
2 chr19:39934800-39937000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
3 chr19:39934800-39937000 Active TSS Skeletal Muscle Female skeletal muscle
4 chr19:39934800-39937000 Active TSS A549 lung
5 chr19:39934800-39937200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr19:39935000-39936800 Active TSS iPS-15b Cell Line embryonic stem cell
7 chr19:39935000-39936800 Active TSS Muscle Satellite Cultured Cells --
8 chr19:39935000-39936800 Active TSS HMEC breast
9 chr19:39935000-39936800 Active TSS NHEK skin
10 chr19:39935000-39937000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr19:39935000-39937000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr19:39935000-39937000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr19:39935000-39937000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr19:39935000-39937000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr19:39935000-39937000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
16 chr19:39935000-39937000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr19:39935000-39937000 Active TSS Psoas Muscle Psoas
18 chr19:39935000-39937000 Active TSS Rectal Smooth Muscle rectum
19 chr19:39935000-39937000 Active TSS Right Ventricle heart
20 chr19:39935000-39937200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
21 chr19:39935000-39937400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:39935000-39937400 Active TSS HUES48 Cell Line embryonic stem cell
23 chr19:39935000-39937400 Active TSS iPS-18 Cell Line embryonic stem cell
24 chr19:39935000-39937400 Active TSS iPS-20b Cell Line embryonic stem cell
25 chr19:39935000-39937600 Active TSS HUES64 Cell Line embryonic stem cell
26 chr19:39935200-39936800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr19:39935200-39936800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr19:39935200-39936800 Active TSS Primary T cells from cord blood blood
29 chr19:39935200-39936800 Active TSS Primary T helper cells PMA-I stimulated --
30 chr19:39935200-39936800 Active TSS Brain Cingulate Gyrus brain
31 chr19:39935200-39936800 Active TSS Brain Hippocampus Middle brain
32 chr19:39935200-39936800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
33 chr19:39935200-39936800 Active TSS Colon Smooth Muscle Colon
34 chr19:39935200-39936800 Active TSS Fetal Lung lung
35 chr19:39935200-39937000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
36 chr19:39935200-39937000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
37 chr19:39935200-39937000 Active TSS Aorta Aorta
38 chr19:39935200-39937000 Active TSS Brain Inferior Temporal Lobe brain
39 chr19:39935200-39937000 Active TSS Esophagus oesophagus
40 chr19:39935200-39937000 Active TSS Fetal Muscle Trunk muscle
41 chr19:39935200-39937000 Active TSS Gastric stomach
42 chr19:39935200-39937000 Active TSS Left Ventricle heart
43 chr19:39935200-39937000 Active TSS Placenta Amnion Placenta Amnion
44 chr19:39935200-39937000 Bivalent/Poised TSS HepG2 liver
45 chr19:39935200-39937000 Active TSS K562 blood
46 chr19:39935200-39937000 Active TSS NHDF-Ad bronchial
47 chr19:39935200-39937000 Active TSS NHLF lung
48 chr19:39935200-39937200 Active TSS ES-I3 Cell Line embryonic stem cell
49 chr19:39935200-39937200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr19:39935200-39937200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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