Variant report

Variant	rs2304535
Chromosome Location	chr4:147881022-147881023
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs2043703	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72943804	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72943833	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72960366	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1826357	chr4:147876484-147900981	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147877600-147882600	Enhancers	Hela-S3	cervix
2	chr4:147880000-147881200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr4:147880600-147881200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr4:147880600-147881400	Enhancers	Osteobl	bone
5	chr4:147880600-147882000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr4:147880800-147881200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr4:147880800-147881200	Enhancers	HMEC	breast
8	chr4:147881000-147881200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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