Variant report

Variant	rs2327931
Chromosome Location	chr6:15994986-15994987
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1544215	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1891516	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs4236168	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4422610	1.00[CEU][hapmap];0.89[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4568455	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4582390	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs4716022	1.00[CEU][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4716023	1.00[CEU][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4716024	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6459438	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.80[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6905830	1.00[CEU][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7766337	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7767090	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9296997	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9464848	0.83[EUR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15988000-15995000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr6:15991200-15995000	Enhancers	K562	blood
3	chr6:15993400-15995400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr6:15994000-15995200	Weak transcription	Fetal Lung	lung
5	chr6:15994000-15995400	Enhancers	Primary T cells fromperipheralblood	blood
6	chr6:15994000-15995400	Enhancers	Lung	lung
7	chr6:15994000-15998600	Enhancers	Adipose Nuclei	Adipose
8	chr6:15994000-15999000	Enhancers	Fetal Intestine Small	intestine
9	chr6:15994200-15995200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:15994200-15998400	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr6:15994200-15999000	Enhancers	Fetal Intestine Large	intestine
12	chr6:15994400-15997800	Weak transcription	Placenta	Placenta
13	chr6:15994400-15997800	Weak transcription	Left Ventricle	heart
14	chr6:15994400-15998000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr6:15994600-15996600	Enhancers	Primary hematopoietic stem cells	blood
16	chr6:15994600-15997800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr6:15994800-15996200	Weak transcription	Fetal Muscle Trunk	muscle
18	chr6:15994800-15998200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr6:15994800-15999000	Enhancers	HUVEC	blood vessel

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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