Variant report

Variant rs234943
Chromosome Location chr6:2197991-2197992
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:2189600-2202800 Weak transcription Pancreas Pancrea
2 chr6:2191200-2203400 Weak transcription Primary T cells from cord blood blood
3 chr6:2191800-2198000 Weak transcription Duodenum Mucosa Duodenum
4 chr6:2192800-2222000 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr6:2193800-2206600 Weak transcription Fetal Intestine Small intestine
6 chr6:2193800-2216800 Weak transcription Gastric stomach
7 chr6:2194400-2198600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr6:2195200-2202800 Weak transcription Aorta Aorta
9 chr6:2196400-2198000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr6:2196400-2198000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr6:2196400-2198000 Enhancers Adipose Nuclei Adipose
12 chr6:2196600-2198000 Enhancers HUES6 Cell Line embryonic stem cell
13 chr6:2196600-2198000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr6:2196600-2198200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr6:2196600-2198400 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr6:2196800-2198000 Enhancers NHLF lung
17 chr6:2196800-2198600 Enhancers Osteobl bone
18 chr6:2197000-2198000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr6:2197000-2198200 Enhancers Sigmoid Colon Sigmoid Colon
20 chr6:2197000-2198200 Enhancers HMEC breast
21 chr6:2197000-2202600 Weak transcription HepG2 liver
22 chr6:2197200-2198000 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr6:2197200-2198200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr6:2197200-2198400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr6:2197400-2198000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr6:2197400-2198200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:2197400-2198400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr6:2197400-2198400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:2197400-2198800 Enhancers HUVEC blood vessel
30 chr6:2197400-2222000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr6:2197600-2198000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr6:2197600-2198000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr6:2197600-2198000 Enhancers Skeletal Muscle Male skeletal muscle
34 chr6:2197600-2198200 Enhancers Right Atrium heart
35 chr6:2197600-2198200 Enhancers HSMM muscle
36 chr6:2197600-2198200 Enhancers NH-A brain
37 chr6:2197600-2198400 Enhancers Fetal Muscle Leg muscle
38 chr6:2197600-2198400 Enhancers NHEK skin
39 chr6:2197600-2202800 Weak transcription Spleen Spleen
40 chr6:2197800-2202800 Weak transcription Left Ventricle heart
41 chr6:2197800-2209400 Weak transcription Stomach Mucosa stomach

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