Variant report

Variant rs398992
Chromosome Location chr6:2172367-2172368
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:2163600-2176800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:2165800-2174000 Weak transcription Primary T cells from cord blood blood
3 chr6:2166400-2185400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr6:2168600-2175000 Weak transcription Gastric stomach
5 chr6:2168600-2176200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:2168600-2176600 Weak transcription Stomach Mucosa stomach
7 chr6:2168600-2176800 Weak transcription Pancreas Pancrea
8 chr6:2168600-2177000 Weak transcription Aorta Aorta
9 chr6:2168800-2177000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr6:2169400-2173600 Weak transcription NHDF-Ad bronchial
11 chr6:2171400-2172400 Enhancers Primary neutrophils fromperipheralblood blood
12 chr6:2171400-2172600 Enhancers Monocytes-CD14+_RO01746 blood
13 chr6:2171600-2172400 Enhancers Primary monocytes fromperipheralblood blood
14 chr6:2171600-2172400 Enhancers Osteobl bone
15 chr6:2171600-2174600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr6:2171600-2177200 Enhancers Primary hematopoietic stem cells short term culture blood
17 chr6:2172000-2172400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:2172000-2172400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:2172200-2172600 Enhancers HepG2 liver
20 chr6:2172200-2173600 Weak transcription Primary hematopoietic stem cells blood

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