Variant report

Variant	rs2350205
Chromosome Location	chr11:26266462-26266463
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1037898	1.00[ASN][1000 genomes]
rs11600572	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11602100	0.88[GIH][hapmap];0.89[MEX][hapmap]
rs11822090	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12806338	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1461397	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1461400	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2045702	0.97[ASN][1000 genomes]
rs34561935	0.95[ASN][1000 genomes]
rs9332433	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832094	chr11:26130733-26292782	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2350205	ENTHD1	trans	cerebellum	SCAN

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26264600-26269000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr11:26265000-26267200	Enhancers	NHLF	lung
3	chr11:26265200-26267200	Enhancers	Muscle Satellite Cultured Cells	--
4	chr11:26265200-26267200	Enhancers	NHDF-Ad	bronchial
5	chr11:26265200-26268800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr11:26265400-26267000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr11:26266400-26267200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr11:26266400-26267400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr11:26266400-26267400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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