The 2.0 version of rSNPBase

Variant report

Variant rs2356424
Chromosome Location chr2:171852621-171852622
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171830600-171902800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:171830800-171891400 Weak transcription Spleen Spleen
3 chr2:171831200-171857400 Weak transcription HSMMtube muscle
4 chr2:171831400-171857000 Weak transcription NHEK skin
5 chr2:171831400-171879200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:171831400-171916200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr2:171838600-171862000 Weak transcription Ovary ovary
8 chr2:171838800-171861800 Weak transcription Colon Smooth Muscle Colon
9 chr2:171839200-171854800 Weak transcription Pancreas Pancrea
10 chr2:171840800-171861800 Weak transcription Small Intestine intestine
11 chr2:171840800-171879200 Weak transcription Brain Hippocampus Middle brain
12 chr2:171841000-171862400 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr2:171841000-171865400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr2:171841000-171877800 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr2:171841000-171895800 Weak transcription H9 Cell Line embryonic stem cell
16 chr2:171841600-171859000 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr2:171841600-171940000 Weak transcription Right Ventricle heart
18 chr2:171842200-171892000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:171842400-171857600 Weak transcription Fetal Brain Female brain
20 chr2:171842600-171912000 Weak transcription Placenta Amnion Placenta Amnion
21 chr2:171843000-171877400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:171843200-171863200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr2:171843200-171871800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr2:171843400-171852800 Weak transcription Thymus Thymus
25 chr2:171843600-171857000 Weak transcription Rectal Smooth Muscle rectum
26 chr2:171843800-171863400 Strong transcription Fetal Thymus thymus
27 chr2:171844600-171853800 Strong transcription Cortex derived primary cultured neurospheres brain
28 chr2:171844600-171868800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr2:171844800-171854200 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr2:171844800-171863400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:171844800-171873000 Strong transcription GM12878-XiMat blood
32 chr2:171845200-171852800 Weak transcription Lung lung
33 chr2:171845200-171861000 Weak transcription Hela-S3 cervix
34 chr2:171845400-171853800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr2:171845400-171854400 Strong transcription iPS-20b Cell Line embryonic stem cell
36 chr2:171845400-171858800 Strong transcription Primary B cells from peripheral blood blood
37 chr2:171846000-171898000 Weak transcription Psoas Muscle Psoas
38 chr2:171846200-171901000 Weak transcription Fetal Brain Male brain
39 chr2:171846600-171855400 Strong transcription Liver Liver
40 chr2:171847200-171857200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr2:171847200-171871600 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr2:171847400-171854000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr2:171847400-171854400 Strong transcription Primary monocytes fromperipheralblood blood
44 chr2:171847400-171855000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr2:171847400-171864200 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr2:171847400-171871600 Strong transcription Dnd41 blood
47 chr2:171847400-171902600 Weak transcription Brain Angular Gyrus brain
48 chr2:171847600-171854000 Strong transcription Rectal Mucosa Donor 31 rectum
49 chr2:171847600-171855000 Strong transcription Fetal Intestine Large intestine
50 chr2:171847600-171857000 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015