The 2.0 version of rSNPBase

Variant report

Variant rs2357435
Chromosome Location chr1:210517695-210517696
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:210503600-210546800 Weak transcription Fetal Intestine Small intestine
2 chr1:210513000-210540400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:210513200-210517800 Enhancers Primary T cells fromperipheralblood blood
4 chr1:210513600-210517800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr1:210513600-210517800 Enhancers Primary T helper cells fromperipheralblood blood
6 chr1:210516400-210517800 Flanking Active TSS Dnd41 blood
7 chr1:210516800-210534400 Weak transcription Fetal Lung lung
8 chr1:210517000-210520000 Weak transcription HSMMtube muscle
9 chr1:210517000-210520000 Weak transcription NH-A brain
10 chr1:210517000-210531400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:210517000-210534400 Weak transcription HSMM muscle
12 chr1:210517200-210518000 Weak transcription Esophagus oesophagus
13 chr1:210517200-210518200 Enhancers Primary T helper 17 cells PMA-I stimulated --
14 chr1:210517200-210518200 Weak transcription NHEK skin
15 chr1:210517200-210518600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:210517200-210518600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:210517200-210518600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:210517200-210518600 Enhancers HMEC breast
19 chr1:210517200-210518600 Enhancers NHDF-Ad bronchial
20 chr1:210517200-210519000 Weak transcription Fetal Heart heart
21 chr1:210517200-210520200 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:210517200-210520600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:210517200-210524400 Weak transcription Lung lung
24 chr1:210517200-210524600 Weak transcription Ovary ovary
25 chr1:210517200-210525400 Weak transcription Thymus Thymus
26 chr1:210517200-210534400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:210517200-210534400 Weak transcription Brain Anterior Caudate brain
28 chr1:210517200-210534600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:210517200-210535800 Weak transcription Right Ventricle heart
30 chr1:210517200-210536000 Weak transcription Fetal Stomach stomach
31 chr1:210517200-210536000 Weak transcription Left Ventricle heart
32 chr1:210517400-210517800 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:210517400-210517800 Enhancers Primary B cells from cord blood blood
34 chr1:210517400-210518000 Enhancers Primary B cells from peripheral blood blood
35 chr1:210517400-210518200 Enhancers Osteobl bone
36 chr1:210517400-210518400 Weak transcription Gastric stomach
37 chr1:210517400-210520000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:210517400-210520000 Weak transcription Aorta Aorta
39 chr1:210517400-210525400 Weak transcription Stomach Smooth Muscle stomach
40 chr1:210517400-210533200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:210517400-210534400 Weak transcription Adipose Nuclei Adipose
42 chr1:210517600-210517800 Enhancers GM12878-XiMat blood
43 chr1:210517600-210519800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:210517600-210522400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:210517600-210536000 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015