Variant report

Variant rs55716781
Chromosome Location chr1:210517141-210517142
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:210503600-210546800 Weak transcription Fetal Intestine Small intestine
2 chr1:210513000-210540400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:210513200-210517800 Enhancers Primary T cells fromperipheralblood blood
4 chr1:210513600-210517600 Enhancers Primary T helper naive cells from peripheral blood blood
5 chr1:210513600-210517800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr1:210513600-210517800 Enhancers Primary T helper cells fromperipheralblood blood
7 chr1:210515200-210517200 Enhancers Fetal Heart heart
8 chr1:210515800-210517400 Active TSS Stomach Smooth Muscle stomach
9 chr1:210516200-210517200 Enhancers HepG2 liver
10 chr1:210516200-210517400 Active TSS Pancreatic Islets Pancreatic Islet
11 chr1:210516400-210517200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:210516400-210517200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:210516400-210517200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
14 chr1:210516400-210517200 Enhancers Cortex derived primary cultured neurospheres brain
15 chr1:210516400-210517200 Active TSS Colonic Mucosa Colon
16 chr1:210516400-210517200 Active TSS Duodenum Smooth Muscle Duodenum
17 chr1:210516400-210517200 Active TSS Ovary ovary
18 chr1:210516400-210517200 Active TSS Pancreas Pancrea
19 chr1:210516400-210517200 Enhancers Small Intestine intestine
20 chr1:210516400-210517400 Active TSS Aorta Aorta
21 chr1:210516400-210517400 Enhancers Fetal Thymus thymus
22 chr1:210516400-210517400 Active TSS Rectal Mucosa Donor 29 rectum
23 chr1:210516400-210517400 Active TSS Rectal Smooth Muscle rectum
24 chr1:210516400-210517400 Flanking Active TSS Osteobl bone
25 chr1:210516400-210517600 Flanking Active TSS GM12878-XiMat blood
26 chr1:210516400-210517800 Flanking Active TSS Dnd41 blood
27 chr1:210516600-210517200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:210516600-210517200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:210516600-210517200 Active TSS Primary monocytes fromperipheralblood blood
30 chr1:210516600-210517200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:210516600-210517200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:210516600-210517200 Active TSS Brain Angular Gyrus brain
33 chr1:210516600-210517200 Active TSS Brain Anterior Caudate brain
34 chr1:210516600-210517200 Flanking Active TSS Brain Inferior Temporal Lobe brain
35 chr1:210516600-210517200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
36 chr1:210516600-210517200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
37 chr1:210516600-210517200 Flanking Active TSS Right Atrium heart
38 chr1:210516600-210517200 Active TSS Stomach Mucosa stomach
39 chr1:210516600-210517200 Active TSS Monocytes-CD14+_RO01746 blood
40 chr1:210516600-210517200 Flanking Active TSS NHDF-Ad bronchial
41 chr1:210516600-210517400 Flanking Active TSS Primary B cells from peripheral blood blood
42 chr1:210516600-210517400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:210516600-210517400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:210516600-210517400 Active TSS Liver Liver
45 chr1:210516600-210517400 Active TSS Colon Smooth Muscle Colon
46 chr1:210516600-210517400 Flanking Active TSS Duodenum Mucosa Duodenum
47 chr1:210516800-210517200 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
48 chr1:210516800-210517200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:210516800-210517200 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:210516800-210517200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links