Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11679577	0.82[EUR][1000 genomes]
rs11884199	0.82[EUR][1000 genomes]
rs1375447	1.00[CHB][hapmap];0.85[CHD][hapmap];0.82[JPT][hapmap]
rs1449088	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs1449090	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs1449091	1.00[CHB][hapmap];0.85[CHD][hapmap];0.82[JPT][hapmap]
rs16828108	1.00[CHB][hapmap]
rs17334471	1.00[CEU][hapmap]
rs1839122	1.00[CHB][hapmap]
rs2167013	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2247924	1.00[CHB][hapmap];0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2594703	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2594704	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2595377	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2595379	1.00[CHB][hapmap];0.82[CHD][hapmap];0.82[JPT][hapmap]
rs2682858	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2682861	1.00[CHB][hapmap];0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2682870	1.00[CHB][hapmap]
rs2682874	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs3738918	1.00[CHB][hapmap]
rs3754584	1.00[CHB][hapmap]
rs4387745	0.82[EUR][1000 genomes]
rs55982967	0.82[EUR][1000 genomes]
rs56259721	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56912937	0.82[EUR][1000 genomes]
rs57030665	0.82[EUR][1000 genomes]
rs6728163	0.82[EUR][1000 genomes]
rs67298161	0.82[EUR][1000 genomes]
rs6761687	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs72907048	0.82[EUR][1000 genomes]
rs7556971	1.00[CHB][hapmap]
rs7600348	0.82[EUR][1000 genomes]
rs976693	1.00[CHB][hapmap];0.85[CHD][hapmap];0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428069	chr2:187575692-187766209	ZNF genes & repeats Weak transcription Active TSS Strong transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases
2	esv3495864	chr2:187633495-187686087	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv3495865	chr2:187633495-187686087	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2370708	HIBCH	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:187637600-187643800	Weak transcription	Placenta	Placenta

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