The 2.0 version of rSNPBase

Variant report

Variant rs2429009
Chromosome Location chr7:116736335-116736336
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:116717200-116744400 Weak transcription Fetal Muscle Trunk muscle
2 chr7:116723000-116738000 Weak transcription NHLF lung
3 chr7:116723200-116738000 Weak transcription Ovary ovary
4 chr7:116724200-116744200 Weak transcription Brain Inferior Temporal Lobe brain
5 chr7:116724400-116750400 Weak transcription Fetal Lung lung
6 chr7:116725400-116766400 Weak transcription Brain Germinal Matrix brain
7 chr7:116727200-116738000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr7:116727800-116737600 Weak transcription HepG2 liver
9 chr7:116728200-116738000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr7:116728200-116738000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr7:116728200-116738000 Weak transcription HSMMtube muscle
12 chr7:116728200-116738200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr7:116728200-116738200 Weak transcription Spleen Spleen
14 chr7:116728200-116741000 Weak transcription Fetal Muscle Leg muscle
15 chr7:116728200-116750600 Weak transcription Small Intestine intestine
16 chr7:116729200-116738000 Weak transcription Stomach Mucosa stomach
17 chr7:116730600-116738200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr7:116730600-116738200 Weak transcription Brain Anterior Caudate brain
19 chr7:116731000-116738400 Weak transcription Stomach Smooth Muscle stomach
20 chr7:116731200-116738000 Weak transcription Aorta Aorta
21 chr7:116731200-116738200 Weak transcription Esophagus oesophagus
22 chr7:116731400-116749000 Weak transcription Fetal Brain Female brain
23 chr7:116731800-116740800 Weak transcription GM12878-XiMat blood
24 chr7:116732000-116738200 Weak transcription Gastric stomach
25 chr7:116732200-116750400 Weak transcription Fetal Intestine Small intestine
26 chr7:116732400-116738200 Weak transcription Left Ventricle heart
27 chr7:116733000-116738000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr7:116733000-116738200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr7:116733000-116741000 Weak transcription K562 blood
30 chr7:116733400-116738000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr7:116733400-116738000 Weak transcription NHDF-Ad bronchial
32 chr7:116734200-116736600 Enhancers Pancreas Pancrea
33 chr7:116734200-116738000 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr7:116734600-116736400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr7:116734800-116744000 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr7:116734800-116750400 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr7:116735000-116737000 Enhancers Fetal Heart heart
38 chr7:116735400-116738200 Weak transcription Right Atrium heart
39 chr7:116735400-116750400 Weak transcription Psoas Muscle Psoas
40 chr7:116735800-116738000 Weak transcription Right Ventricle heart
41 chr7:116736200-116736800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr7:116736200-116736800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr7:116736200-116737000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
44 chr7:116736200-116737400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015