The 2.0 version of rSNPBase

Variant report

Variant rs2429040
Chromosome Location chr7:116710756-116710757
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:116686800-116712400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr7:116690600-116711600 Weak transcription K562 blood
3 chr7:116702200-116712600 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr7:116702400-116711600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr7:116702400-116711600 Weak transcription HMEC breast
6 chr7:116702400-116712800 Weak transcription Gastric stomach
7 chr7:116702400-116712800 Weak transcription HSMMtube muscle
8 chr7:116703000-116712800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr7:116704800-116712400 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr7:116706200-116711600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr7:116706400-116712600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr7:116706800-116712800 Weak transcription Lung lung
13 chr7:116707200-116712600 Weak transcription Primary hematopoietic stem cells blood
14 chr7:116707600-116712200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr7:116707800-116711800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr7:116707800-116712400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr7:116708000-116711800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr7:116708000-116712400 Weak transcription Muscle Satellite Cultured Cells --
19 chr7:116708000-116712800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr7:116708200-116712600 Weak transcription Osteobl bone
21 chr7:116708200-116712800 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr7:116709000-116711000 Enhancers Cortex derived primary cultured neurospheres brain
23 chr7:116709000-116711600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr7:116709000-116711600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr7:116709000-116711600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr7:116709000-116712600 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr7:116709000-116712800 Weak transcription Thymus Thymus
28 chr7:116709000-116712800 Weak transcription HSMM muscle
29 chr7:116709200-116711600 Weak transcription NHEK skin
30 chr7:116709200-116712200 Weak transcription HUVEC blood vessel
31 chr7:116709200-116712400 Weak transcription NH-A brain
32 chr7:116709200-116712600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr7:116709200-116712600 Weak transcription Brain Inferior Temporal Lobe brain
34 chr7:116709200-116712800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr7:116709200-116712800 Weak transcription Primary monocytes fromperipheralblood blood
36 chr7:116709200-116712800 Weak transcription Primary T cells from cord blood blood
37 chr7:116709200-116712800 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr7:116709200-116712800 Enhancers Brain Germinal Matrix brain
39 chr7:116709400-116711600 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr7:116709600-116711000 Enhancers Aorta Aorta
41 chr7:116709800-116711800 Weak transcription Colon Smooth Muscle Colon
42 chr7:116709800-116712200 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr7:116709800-116712600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr7:116709800-116712800 Weak transcription H1 Cell Line embryonic stem cell
45 chr7:116709800-116712800 Weak transcription Right Atrium heart
46 chr7:116709800-116715400 Weak transcription Right Ventricle heart
47 chr7:116710000-116711000 Weak transcription Fetal Thymus thymus
48 chr7:116710000-116712200 Weak transcription Fetal Muscle Leg muscle
49 chr7:116710000-116712400 Weak transcription Brain Angular Gyrus brain
50 chr7:116710000-116712400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015