Variant report

Variant	rs2429013
Chromosome Location	chr7:116744517-116744518
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2429009	1.00[ASW][hapmap];0.92[CEU][hapmap];0.97[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2429040	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116724400-116750400	Weak transcription	Fetal Lung	lung
2	chr7:116725400-116766400	Weak transcription	Brain Germinal Matrix	brain
3	chr7:116728200-116750600	Weak transcription	Small Intestine	intestine
4	chr7:116731400-116749000	Weak transcription	Fetal Brain Female	brain
5	chr7:116732200-116750400	Weak transcription	Fetal Intestine Small	intestine
6	chr7:116734800-116750400	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr7:116735400-116750400	Weak transcription	Psoas Muscle	Psoas
8	chr7:116736800-116749000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr7:116737000-116749800	Weak transcription	Fetal Heart	heart
10	chr7:116737000-116750600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr7:116737400-116758800	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr7:116738400-116750800	Weak transcription	Aorta	Aorta
13	chr7:116738400-116774200	Weak transcription	Ovary	ovary
14	chr7:116738400-116779600	Weak transcription	Esophagus	oesophagus
15	chr7:116738600-116744800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr7:116738600-116749400	Weak transcription	Brain Anterior Caudate	brain
17	chr7:116738600-116750400	Weak transcription	Left Ventricle	heart
18	chr7:116738600-116750400	Weak transcription	Lung	lung
19	chr7:116738800-116745200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr7:116738800-116750400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr7:116738800-116750400	Weak transcription	Rectal Smooth Muscle	rectum
22	chr7:116738800-116750400	Weak transcription	Stomach Smooth Muscle	stomach
23	chr7:116738800-116760400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr7:116738800-116763400	Weak transcription	Hela-S3	cervix
25	chr7:116739000-116750400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr7:116739400-116758800	Weak transcription	NH-A	brain
27	chr7:116739600-116745000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr7:116741400-116750400	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr7:116741600-116745200	Weak transcription	Fetal Muscle Leg	muscle
30	chr7:116741600-116748200	Weak transcription	GM12878-XiMat	blood
31	chr7:116741600-116752800	Weak transcription	K562	blood
32	chr7:116742600-116744800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr7:116743400-116744600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr7:116743800-116760200	Weak transcription	Placenta	Placenta

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