Variant report
| Variant | rs2431023 |
|---|---|
| Chromosome Location | chr15:57553832-57553833 |
| allele | A/G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:57511800-57565000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 2 | chr15:57520400-57576000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 3 | chr15:57522400-57565400 | Weak transcription | Spleen | Spleen |
| 4 | chr15:57522800-57585000 | Strong transcription | Fetal Thymus | thymus |
| 5 | chr15:57525600-57556800 | Weak transcription | Pancreas | Pancrea |
| 6 | chr15:57526600-57554400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr15:57526600-57574200 | Weak transcription | Hela-S3 | cervix |
| 8 | chr15:57526800-57554200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 9 | chr15:57528400-57554800 | Weak transcription | NHEK | skin |
| 10 | chr15:57533600-57568800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 11 | chr15:57536800-57574200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 12 | chr15:57537800-57555200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr15:57537800-57598200 | Weak transcription | Colonic Mucosa | Colon |
| 14 | chr15:57538400-57564800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 15 | chr15:57538800-57554200 | Weak transcription | Fetal Brain Female | brain |
| 16 | chr15:57539400-57554400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 17 | chr15:57539400-57574800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 18 | chr15:57539600-57556800 | Weak transcription | Gastric | stomach |
| 19 | chr15:57539600-57565200 | Weak transcription | Aorta | Aorta |
| 20 | chr15:57539600-57565200 | Weak transcription | Esophagus | oesophagus |
| 21 | chr15:57540000-57554400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 22 | chr15:57540200-57555000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 23 | chr15:57540600-57556800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 24 | chr15:57540600-57557000 | Weak transcription | Lung | lung |
| 25 | chr15:57540600-57565400 | Weak transcription | Ovary | ovary |
| 26 | chr15:57543000-57556400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 27 | chr15:57543200-57565200 | Weak transcription | Right Ventricle | heart |
| 28 | chr15:57544600-57574800 | Weak transcription | Fetal Brain Male | brain |
| 29 | chr15:57545800-57554400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 30 | chr15:57545800-57554400 | Weak transcription | HMEC | breast |
| 31 | chr15:57545800-57554600 | Weak transcription | Colon Smooth Muscle | Colon |
| 32 | chr15:57545800-57565200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 33 | chr15:57546000-57554400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 34 | chr15:57546000-57554400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 35 | chr15:57546000-57554400 | Weak transcription | A549 | lung |
| 36 | chr15:57546000-57580600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 37 | chr15:57546200-57554200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 38 | chr15:57546600-57554200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 39 | chr15:57546600-57554400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 40 | chr15:57546600-57554400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 41 | chr15:57546800-57554200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 42 | chr15:57546800-57554400 | Weak transcription | GM12878-XiMat | blood |
| 43 | chr15:57547000-57554200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 44 | chr15:57548200-57556400 | Weak transcription | Fetal Stomach | stomach |
| 45 | chr15:57548200-57578000 | Weak transcription | Fetal Heart | heart |
| 46 | chr15:57548400-57554200 | Weak transcription | HUVEC | blood vessel |
| 47 | chr15:57548400-57554600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 48 | chr15:57548600-57554000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr15:57548600-57554200 | Weak transcription | Liver | Liver |
| 50 | chr15:57548600-57554400 | Weak transcription | H9 Cell Line | embryonic stem cell |
