Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:120288326..120291093-chr8:120293809..120295588,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1154819	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap]
rs11777159	0.81[AMR][1000 genomes]
rs1364704	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs1425048	0.94[AMR][1000 genomes]
rs1425049	1.00[CEU][hapmap]
rs1425068	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes]
rs1579353	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1582675	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16892528	1.00[CHB][hapmap]
rs1895706	1.00[CEU][hapmap];0.88[AMR][1000 genomes]
rs2432970	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2432971	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2432976	0.91[ASN][1000 genomes]
rs2432978	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2432984	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes]
rs2432985	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2468164	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2469989	0.96[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs2469993	0.96[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs2470041	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs2470042	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs2875872	1.00[CEU][hapmap];0.90[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs764292	0.93[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868916	chr8:119911943-120762250	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv1026655	chr8:120282929-120522329	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:120291200-120302800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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