Variant report

Variant	rs2472177
Chromosome Location	chr10:38384015-38384016
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:35)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:35 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr10:38382523-38384343	SK-N-SH	brain:	n/a	n/a
2	POLR2A	chr10:38382843-38384039	MCF-7	breast:	n/a	n/a
3	MAX	chr10:38382814-38384251	HepG2	liver:	n/a	n/a
4	ZNF263	chr10:38383079-38384624	HEK293-T-REx	kidney:	n/a	chr10:38384250-38384259
5	POLR2A	chr10:38382997-38384021	Hela-S3	cervix:	n/a	n/a
6	ELF1	chr10:38382803-38384256	GM12878	blood:	n/a	chr10:38382977-38382988
7	E2F6	chr10:38383032-38384057	K562	blood:	n/a	n/a
8	UBTF	chr10:38383629-38384015	K562	blood:	n/a	n/a
9	SREBP1	chr10:38382535-38384104	GM12878	blood:	n/a	n/a
10	SIN3AK20	chr10:38383560-38384083	K562	blood:	n/a	n/a
11	POLR2A	chr10:38382802-38384100	GM12878	blood:	n/a	n/a
12	RCOR1	chr10:38382633-38384352	IMR90	lung:	n/a	n/a
13	MYC	chr10:38382964-38384045	K562	blood:	n/a	n/a
14	MXI1	chr10:38382524-38384127	IMR90	lung:	n/a	n/a
15	MAX	chr10:38383595-38384043	K562	blood:	n/a	n/a
16	POLR2A	chr10:38382799-38384017	PBDE	blood:	n/a	n/a
17	HEY1	chr10:38382920-38384049	HepG2	liver:	n/a	chr10:38383768-38383783
18	MAX	chr10:38382843-38384157	ECC-1	luminal epithelium:	n/a	n/a
19	MAZ	chr10:38382812-38384343	IMR90	lung:	n/a	n/a
20	MAX	chr10:38382817-38384155	K562	blood:	n/a	n/a
21	MAX	chr10:38382832-38384041	GM12878	blood:	n/a	n/a
22	CBX3	chr10:38383758-38384125	K562	blood:	n/a	n/a
23	POLR2A	chr10:38382804-38384067	GM12892	blood:	n/a	n/a
24	SETDB1	chr10:38382770-38384280	K562	blood:	n/a	n/a
25	RCOR1	chr10:38383944-38384108	K562	blood:	n/a	n/a
26	POLR2A	chr10:38383120-38384033	HepG2	liver:	n/a	n/a
27	MAX	chr10:38382612-38384228	A549	lung:	n/a	n/a
28	MAX	chr10:38382910-38384074	K562	blood:	n/a	n/a
29	HCFC1	chr10:38382693-38384024	Hela-S3	cervix:	n/a	n/a
30	POLR2A	chr10:38382814-38384048	GM19193	blood:	n/a	n/a
31	MYC	chr10:38382991-38384059	MCF10A-Er-Src	breast:	n/a	n/a
32	E2F6	chr10:38382822-38384496	K562	blood:	n/a	n/a
33	MAX	chr10:38382607-38384259	MCF-7	breast:	n/a	n/a
34	MAX	chr10:38382718-38384141	ECC-1	luminal epithelium:	n/a	n/a
35	MAX	chr10:38382963-38384060	HepG2	liver:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:38145480..38148192-chr10:38381964..38384579,2	MCF-7	breast:
2	chr10:38299411..38301761-chr10:38382405..38384673,2	MCF-7	breast:
3	chr10:38299349..38301423-chr10:38382665..38385531,5	K562	blood:
4	chr10:38298279..38301657-chr10:38381478..38384966,6	MCF-7	breast:
5	chr10:38298494..38301362-chr10:38382665..38385531,3	K562	blood:

No data

Variant related genes	Relation type
ZNF37A	TF binding region
FXYD6P2	TF binding region
ENSG00000198105	Chromatin interaction
ENSG00000189180	Chromatin interaction
ENSG00000236514	Chromatin interaction

Extended variants
information (count: 135 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:126)

rs_ID	r²[population]
rs11011452	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11011461	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1138252	0.96[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs1329786	0.92[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs13503	0.86[CHD][hapmap];0.84[GIH][hapmap]
rs1548255	0.94[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[GIH][hapmap];0.91[JPT][hapmap];0.88[MEX][hapmap];0.98[TSI][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs176838	1.00[CEU][hapmap];0.95[CHB][hapmap];0.82[CHD][hapmap];0.86[GIH][hapmap];0.91[JPT][hapmap];0.88[MEX][hapmap];0.95[TSI][hapmap]
rs176876	1.00[ASN][1000 genomes]
rs176877	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs176879	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs176880	0.94[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[GIH][hapmap];0.91[JPT][hapmap];0.88[MEX][hapmap];0.98[TSI][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs176881	0.85[EUR][1000 genomes]
rs176882	0.96[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs176885	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs176886	0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs176887	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs176889	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs1813028	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1854563	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1985707	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1998062	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2008449	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2021649	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2021650	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2023299	0.98[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs2023351	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2144859	0.89[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs2178962	0.99[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2180412	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2263162	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2263163	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2263164	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2384730	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2384731	0.94[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs2472150	0.88[CHD][hapmap];0.81[GIH][hapmap]
rs2472173	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2472174	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2472175	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2472176	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2472178	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2472179	0.87[ASN][1000 genomes]
rs2472180	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2472181	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2472183	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2474554	0.90[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs2474563	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2474564	0.98[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs2474565	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2474566	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474567	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474568	0.94[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[GIH][hapmap];0.91[JPT][hapmap];0.88[MEX][hapmap];0.98[TSI][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474569	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474570	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];0.88[MEX][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs2474571	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474572	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2474573	0.94[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.83[MKK][hapmap];0.93[YRI][hapmap];0.99[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2474574	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474575	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474579	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474580	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2474581	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2474584	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2474586	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2474587	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2474588	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2474590	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2474591	0.96[ASN][1000 genomes]
rs2474594	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2474595	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2474596	0.93[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs2474597	0.96[ASN][1000 genomes]
rs2474598	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2474599	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2474610	0.90[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs2504120	0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2504121	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2504127	0.99[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2504139	0.99[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2504140	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2504141	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2504142	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2504143	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2504148	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2504149	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2505179	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs2505185	0.94[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs2505186	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2505187	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2505188	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2505189	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2505190	0.91[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs2505191	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2505192	0.82[JPT][hapmap]
rs2505193	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2505194	0.94[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[GIH][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.98[TSI][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2505195	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2505196	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2505197	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2505198	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2505202	0.94[ASW][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.91[JPT][hapmap];0.93[LWK][hapmap];0.88[MEX][hapmap];1.00[YRI][hapmap]
rs2505203	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2505235	0.91[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs2505236	0.88[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs2505237	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2505241	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2505244	0.94[ASN][1000 genomes]
rs2505248	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2505249	0.90[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs2505250	0.87[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs2505251	0.88[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs2505252	0.88[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs2505258	0.91[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs2505259	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2505260	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2800485	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.96[GIH][hapmap];0.95[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.90[TSI][hapmap];0.96[YRI][hapmap]
rs2983343	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs496627	0.86[CHD][hapmap];0.84[GIH][hapmap]
rs626519	0.86[CHD][hapmap];0.84[GIH][hapmap]
rs645064	0.88[CHD][hapmap];0.84[GIH][hapmap]
rs6482060	0.87[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs71491246	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7915062	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs9299760	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs932538	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9417297	0.81[EUR][1000 genomes]
rs9418322	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895030	chr10:37715737-38674609	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv1045684	chr10:37765361-38426204	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	nsv540564	chr10:37765361-38426204	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
4	nsv1040704	chr10:37940024-38451917	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
5	nsv1051121	chr10:38155991-38426204	Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
6	nsv540565	chr10:38155991-38426204	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
7	nsv540566	chr10:38301001-38680127	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
8	nsv550419	chr10:38311777-38501654	Enhancers Strong transcription Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
9	nsv6465	chr10:38377662-38422125	Weak transcription Strong transcription ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs2472177	ZNF37A///ZNF37B	Cis_1M	lymphoblastoid	RTeQTL
rs2472177	ZNF37A	cis	lymphoblastoid	seeQTL
rs2472177	LOC399744	cis	parietal	SCAN
rs2472177	HSD17B7///HSD17B7P2///LOC730412	Cis_1M	lymphoblastoid	RTeQTL
rs2472177	HSD17B7P2	cis	parietal	SCAN
rs2472177	ZNF37A	Cis_1M	lymphoblastoid	RTeQTL
rs2472177	HSD17B7P2	cis	Whole Blood	GTEx
rs2472177	ZNF25	cis	cerebellum	SCAN

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:38382600-38384200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr10:38382600-38384200	Flanking Active TSS	Primary B cells from cord blood	blood
3	chr10:38382600-38384200	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
4	chr10:38382600-38384200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr10:38382600-38384200	Active TSS	Aorta	Aorta
6	chr10:38382600-38384200	Active TSS	Fetal Intestine Large	intestine
7	chr10:38382600-38384200	Active TSS	Fetal Intestine Small	intestine
8	chr10:38382600-38384200	Active TSS	Ovary	ovary
9	chr10:38382600-38384200	Active TSS	Psoas Muscle	Psoas
10	chr10:38382600-38384400	Flanking Active TSS	Primary T cells fromperipheralblood	blood
11	chr10:38382600-38384400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr10:38382600-38384400	Active TSS	Fetal Kidney	kidney
13	chr10:38382600-38384400	Active TSS	Pancreatic Islets	Pancreatic Islet
14	chr10:38382600-38384400	Active TSS	HSMMtube	muscle
15	chr10:38382600-38384400	Active TSS	NHLF	lung
16	chr10:38382600-38384600	Active TSS	iPS-15b Cell Line	embryonic stem cell
17	chr10:38382600-38384600	Active TSS	A549	lung
18	chr10:38382600-38384800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr10:38382600-38384800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr10:38382800-38384200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr10:38382800-38384400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr10:38382800-38384400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr10:38382800-38384400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr10:38382800-38384400	Active TSS	iPS-18 Cell Line	embryonic stem cell
25	chr10:38382800-38384600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr10:38382800-38384800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
27	chr10:38382800-38384800	Active TSS	H9 Cell Line	embryonic stem cell
28	chr10:38383000-38384200	Active TSS	iPS-20b Cell Line	embryonic stem cell
29	chr10:38383000-38384200	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
30	chr10:38383000-38384200	Active TSS	Colon Smooth Muscle	Colon
31	chr10:38383000-38384200	Active TSS	Pancreas	Pancrea
32	chr10:38383000-38384200	Active TSS	HMEC	breast
33	chr10:38383000-38384400	Active TSS	HUES48 Cell Line	embryonic stem cell
34	chr10:38383000-38384600	Active TSS	HSMM	muscle
35	chr10:38383000-38384800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr10:38383200-38384200	Active TSS	NHEK	skin
37	chr10:38383400-38384400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
38	chr10:38383400-38384600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
39	chr10:38383400-38384600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr10:38383600-38384200	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
41	chr10:38383600-38384200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
42	chr10:38383600-38384200	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr10:38383600-38384400	Flanking Active TSS	Primary hematopoietic stem cells	blood
44	chr10:38383600-38384400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
45	chr10:38383600-38384600	Flanking Active TSS	Adipose Nuclei	Adipose
46	chr10:38383600-38384600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
47	chr10:38383600-38385600	Transcr. at gene 5' and 3'	Dnd41	blood
48	chr10:38383800-38384200	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
49	chr10:38383800-38384200	Flanking Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
50	chr10:38383800-38384200	Flanking Active TSS	Primary B cells from peripheral blood	blood

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