The 2.0 version of rSNPBase

Variant report

Variant rs2476027
Chromosome Location chr4:74473861-74473862
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:74463800-74474200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr4:74464200-74476400 Enhancers Stomach Mucosa stomach
3 chr4:74464200-74477200 Enhancers Fetal Intestine Small intestine
4 chr4:74465000-74475400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr4:74465400-74483000 Weak transcription Esophagus oesophagus
6 chr4:74465800-74476000 Weak transcription Placenta Placenta
7 chr4:74466800-74474600 Weak transcription Fetal Kidney kidney
8 chr4:74467000-74474400 Weak transcription Rectal Smooth Muscle rectum
9 chr4:74469400-74474400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr4:74469800-74474400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr4:74469800-74474400 Weak transcription Colon Smooth Muscle Colon
12 chr4:74469800-74474600 Weak transcription Liver Liver
13 chr4:74469800-74477200 Enhancers HepG2 liver
14 chr4:74470000-74474400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr4:74470000-74475400 Weak transcription Fetal Lung lung
16 chr4:74470000-74475400 Weak transcription Stomach Smooth Muscle stomach
17 chr4:74470800-74476000 Enhancers Fetal Intestine Large intestine
18 chr4:74472200-74474400 Enhancers HMEC breast
19 chr4:74472200-74485600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr4:74472400-74477800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr4:74472800-74474400 Weak transcription Colonic Mucosa Colon
22 chr4:74472800-74476200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr4:74472800-74483000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr4:74473000-74476600 Enhancers NHEK skin
25 chr4:74473200-74474400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr4:74473200-74474400 Weak transcription Small Intestine intestine
27 chr4:74473200-74476000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr4:74473200-74476200 Weak transcription Gastric stomach
29 chr4:74473400-74474400 Weak transcription Duodenum Mucosa Duodenum
30 chr4:74473400-74474400 Enhancers A549 lung
31 chr4:74473400-74474800 Enhancers GM12878-XiMat blood
32 chr4:74473400-74476200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr4:74473400-74476400 Enhancers Dnd41 blood
34 chr4:74473600-74474400 Weak transcription Fetal Thymus thymus
35 chr4:74473600-74474400 Weak transcription Thymus Thymus
36 chr4:74473600-74474600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr4:74473600-74475400 Enhancers Rectal Mucosa Donor 29 rectum
38 chr4:74473600-74475800 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr4:74473600-74476000 Enhancers Rectal Mucosa Donor 31 rectum
40 chr4:74473800-74474200 Weak transcription Muscle Satellite Cultured Cells --
41 chr4:74473800-74474200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr4:74473800-74474200 Weak transcription Pancreas Pancrea
43 chr4:74473800-74474200 Weak transcription HSMM muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015