Variant report

Variant	rs6826233
Chromosome Location	chr4:74321570-74321571
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1247584	1.00[AMR][1000 genomes]
rs1247585	1.00[AMR][1000 genomes]
rs1247586	1.00[AMR][1000 genomes]
rs1247589	1.00[AMR][1000 genomes]
rs1247590	1.00[AMR][1000 genomes]
rs1247591	1.00[AMR][1000 genomes]
rs1247592	1.00[AMR][1000 genomes]
rs1247595	1.00[AMR][1000 genomes]
rs1247596	1.00[AMR][1000 genomes]
rs1247598	1.00[AMR][1000 genomes]
rs1247600	1.00[AMR][1000 genomes]
rs1261933	1.00[AMR][1000 genomes]
rs1528920	1.00[AMR][1000 genomes]
rs1528921	1.00[AMR][1000 genomes]
rs1729715	1.00[AMR][1000 genomes]
rs1729716	1.00[AMR][1000 genomes]
rs1745285	1.00[AMR][1000 genomes]
rs1745288	1.00[AMR][1000 genomes]
rs2476027	1.00[AMR][1000 genomes]
rs55678226	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3430875	chr4:74243646-74420354	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:74319600-74324400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:74320800-74322000	Weak transcription	Fetal Intestine Small	intestine
3	chr4:74320800-74322000	Strong transcription	HepG2	liver
4	chr4:74321400-74322000	Weak transcription	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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