Variant report

Variant	rs2488067
Chromosome Location	chr10:94506738-94506739
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11814666	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs11814743	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs11817137	1.00[CEU][hapmap]
rs11818622	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs17107841	1.00[ASN][1000 genomes]
rs17374868	1.00[ASN][1000 genomes]
rs61862789	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862790	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862791	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862792	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862793	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862816	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862817	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862818	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94501200-94506800	Weak transcription	Spleen	Spleen
2	chr10:94502200-94507400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr10:94502600-94510800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr10:94503000-94506800	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr10:94503200-94507000	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr10:94504200-94507400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr10:94504200-94510600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr10:94504400-94506800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
9	chr10:94504600-94506800	Weak transcription	Primary B cells from cord blood	blood
10	chr10:94506000-94508600	Enhancers	Primary B cells from peripheral blood	blood
11	chr10:94506400-94508200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
12	chr10:94506400-94509600	Enhancers	K562	blood
13	chr10:94506600-94507800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
14	chr10:94506600-94508200	Enhancers	Primary T cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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