Variant report

Variant	rs61862817
Chromosome Location	chr10:94507479-94507480
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:94505490..94508410-chr10:94509221..94513628,4	K562	blood:
2	chr10:94506528..94510913-chr10:94515438..94518140,4	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs17107841	1.00[ASN][1000 genomes]
rs17374868	1.00[ASN][1000 genomes]
rs2488067	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41290178	1.00[AFR][1000 genomes]
rs41290182	1.00[AFR][1000 genomes]
rs61860813	1.00[AFR][1000 genomes]
rs61860815	1.00[AFR][1000 genomes]
rs61860816	1.00[AFR][1000 genomes]
rs61860817	1.00[AFR][1000 genomes]
rs61860818	1.00[AFR][1000 genomes]
rs61860821	1.00[AFR][1000 genomes]
rs61860830	1.00[AFR][1000 genomes]
rs61860835	1.00[AFR][1000 genomes]
rs61860858	1.00[AFR][1000 genomes]
rs61862260	1.00[AFR][1000 genomes]
rs61862271	1.00[AFR][1000 genomes]
rs61862280	1.00[AFR][1000 genomes]
rs61862285	1.00[AFR][1000 genomes]
rs61862316	1.00[AFR][1000 genomes]
rs61862319	1.00[AFR][1000 genomes]
rs61862320	1.00[AFR][1000 genomes]
rs61862321	1.00[AFR][1000 genomes]
rs61862322	1.00[AFR][1000 genomes]
rs61862325	1.00[AFR][1000 genomes]
rs61862326	1.00[AFR][1000 genomes]
rs61862330	1.00[AFR][1000 genomes]
rs61862331	1.00[AFR][1000 genomes]
rs61862789	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862790	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862791	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862792	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862793	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862816	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862818	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862821	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862823	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61862824	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs61862829	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94502600-94510800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr10:94504200-94510600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr10:94506000-94508600	Enhancers	Primary B cells from peripheral blood	blood
4	chr10:94506400-94508200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr10:94506400-94509600	Enhancers	K562	blood
6	chr10:94506600-94507800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr10:94506600-94508200	Enhancers	Primary T cells fromperipheralblood	blood
8	chr10:94506800-94507800	Enhancers	Primary B cells from cord blood	blood
9	chr10:94506800-94507800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
10	chr10:94506800-94508400	Enhancers	Spleen	Spleen
11	chr10:94506800-94508600	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr10:94506800-94508800	Enhancers	Primary neutrophils fromperipheralblood	blood
13	chr10:94507000-94507600	Enhancers	Primary T helper naive cells from peripheral blood	blood
14	chr10:94507000-94507800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
15	chr10:94507000-94507800	Enhancers	Primary T helper cells fromperipheralblood	blood
16	chr10:94507000-94508400	Enhancers	Primary T cells from cord blood	blood
17	chr10:94507000-94508800	Enhancers	Monocytes-CD14+_RO01746	blood
18	chr10:94507200-94507600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
19	chr10:94507200-94508400	Bivalent Enhancer	HepG2	liver
20	chr10:94507400-94507800	Enhancers	Primary hematopoietic stem cells short term culture	blood
21	chr10:94507400-94507800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
22	chr10:94507400-94507800	Enhancers	Stomach Mucosa	stomach
23	chr10:94507400-94507800	Bivalent Enhancer	GM12878-XiMat	blood
24	chr10:94507400-94508600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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