Variant report

Variant	rs61862821
Chromosome Location	chr10:94513122-94513123
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:94500690..94502613-chr10:94511786..94513783,2	K562	blood:
2	chr10:94505490..94508410-chr10:94509221..94513628,4	K562	blood:
3	chr10:94331646..94333667-chr10:94512127..94514610,2	K562	blood:
4	chr10:94511052..94514419-chr10:94514793..94517097,3	K562	blood:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs41290178	1.00[AFR][1000 genomes]
rs41290182	1.00[AFR][1000 genomes]
rs61860813	1.00[AFR][1000 genomes]
rs61860815	1.00[AFR][1000 genomes]
rs61860816	1.00[AFR][1000 genomes]
rs61860817	1.00[AFR][1000 genomes]
rs61860818	1.00[AFR][1000 genomes]
rs61860821	1.00[AFR][1000 genomes]
rs61860830	1.00[AFR][1000 genomes]
rs61860835	1.00[AFR][1000 genomes]
rs61860858	1.00[AFR][1000 genomes]
rs61862260	1.00[AFR][1000 genomes]
rs61862271	1.00[AFR][1000 genomes]
rs61862280	1.00[AFR][1000 genomes]
rs61862285	1.00[AFR][1000 genomes]
rs61862316	1.00[AFR][1000 genomes]
rs61862319	1.00[AFR][1000 genomes]
rs61862320	1.00[AFR][1000 genomes]
rs61862321	1.00[AFR][1000 genomes]
rs61862322	1.00[AFR][1000 genomes]
rs61862325	1.00[AFR][1000 genomes]
rs61862326	1.00[AFR][1000 genomes]
rs61862330	1.00[AFR][1000 genomes]
rs61862331	1.00[AFR][1000 genomes]
rs61862338	1.00[AFR][1000 genomes]
rs61862339	1.00[AFR][1000 genomes]
rs61862340	1.00[AFR][1000 genomes]
rs61862341	1.00[AFR][1000 genomes]
rs61862789	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862790	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862791	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862792	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862793	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862816	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862817	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862818	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862823	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61862824	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61862829	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94507800-94513200	Weak transcription	Primary B cells from cord blood	blood
2	chr10:94511200-94513200	Weak transcription	Primary hematopoietic stem cells	blood
3	chr10:94511200-94513800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr10:94511200-94515600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:94511200-94515600	Weak transcription	Hela-S3	cervix
6	chr10:94511200-94516400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr10:94511400-94513800	Weak transcription	HUVEC	blood vessel
8	chr10:94511400-94516200	Weak transcription	Osteobl	bone
9	chr10:94511400-94516400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr10:94511600-94513200	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr10:94511600-94515600	Weak transcription	Adipose Nuclei	Adipose
12	chr10:94511600-94515600	Weak transcription	Colon Smooth Muscle	Colon
13	chr10:94511600-94515800	Weak transcription	A549	lung
14	chr10:94511800-94513400	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr10:94511800-94514800	Weak transcription	HepG2	liver
16	chr10:94512200-94516600	Enhancers	Primary B cells from peripheral blood	blood
17	chr10:94513000-94515600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr10:94513000-94515600	Enhancers	K562	blood
19	chr10:94513000-94516000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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