Variant report

Variant	rs2497304
Chromosome Location	chr10:94492716-94492717
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10786050	0.82[JPT][hapmap]
rs10882091	0.85[JPT][hapmap]
rs10882094	0.85[JPT][hapmap]
rs1544210	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2488075	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2497305	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2497306	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4933734	0.85[JPT][hapmap]
rs61862778	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61862780	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6583830	0.85[JPT][hapmap]
rs7900689	0.85[JPT][hapmap]
rs7914814	0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2497304	KIF11	cis	cerebellum	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94491200-94493800	Weak transcription	Primary B cells from cord blood	blood
2	chr10:94492400-94493000	Bivalent Enhancer	GM12878-XiMat	blood
3	chr10:94492600-94493200	Enhancers	Primary B cells from peripheral blood	blood
4	chr10:94492600-94493400	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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