Variant report

Variant rs2517582
Chromosome Location chr6:30808762-30808763
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30796800-30811000 Weak transcription Right Ventricle heart
2 chr6:30797200-30812000 Weak transcription Lung lung
3 chr6:30798400-30809000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:30799200-30812200 Weak transcription Spleen Spleen
5 chr6:30803200-30808800 Weak transcription Primary T cells from cord blood blood
6 chr6:30803200-30809200 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr6:30803200-30809200 Weak transcription Right Atrium heart
8 chr6:30803200-30811400 Enhancers Fetal Thymus thymus
9 chr6:30803200-30811400 Enhancers Thymus Thymus
10 chr6:30803400-30808800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr6:30803400-30809400 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr6:30803600-30808800 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr6:30803800-30811200 Enhancers Dnd41 blood
14 chr6:30804600-30809800 Weak transcription Fetal Kidney kidney
15 chr6:30804600-30811200 Weak transcription Adipose Nuclei Adipose
16 chr6:30804600-30811200 Weak transcription Stomach Smooth Muscle stomach
17 chr6:30804600-30811600 Weak transcription Rectal Smooth Muscle rectum
18 chr6:30804800-30809000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr6:30805000-30809000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:30805000-30809200 Weak transcription Left Ventricle heart
21 chr6:30805000-30809200 Weak transcription Osteobl bone
22 chr6:30805000-30809400 Weak transcription HSMMtube muscle
23 chr6:30805000-30811000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:30805200-30809000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr6:30805600-30809400 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr6:30805600-30811200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr6:30805800-30809800 Weak transcription Fetal Heart heart
28 chr6:30805800-30811000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr6:30805800-30811200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr6:30806000-30809200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr6:30806000-30809800 Weak transcription Fetal Lung lung
32 chr6:30806400-30810000 Genic enhancers HUES6 Cell Line embryonic stem cell
33 chr6:30806600-30809000 Weak transcription GM12878-XiMat blood
34 chr6:30806600-30811600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr6:30806800-30810000 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr6:30806800-30811400 Strong transcription H9 Cell Line embryonic stem cell
37 chr6:30806800-30816200 Enhancers Placenta Placenta
38 chr6:30807000-30810200 Strong transcription iPS-15b Cell Line embryonic stem cell
39 chr6:30807000-30811000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr6:30807200-30808800 Enhancers Fetal Intestine Large intestine
41 chr6:30807400-30808800 Enhancers Rectal Mucosa Donor 29 rectum
42 chr6:30807400-30809200 Enhancers Placenta Amnion Placenta Amnion
43 chr6:30807400-30810200 Enhancers Stomach Mucosa stomach
44 chr6:30807400-30812200 Enhancers Duodenum Mucosa Duodenum
45 chr6:30807600-30809800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr6:30807600-30810000 Enhancers A549 lung
47 chr6:30807600-30810200 Enhancers K562 blood
48 chr6:30807800-30809200 Weak transcription Gastric stomach
49 chr6:30807800-30810800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr6:30807800-30810800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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