The 2.0 version of rSNPBase

Variant report

Variant rs2518124
Chromosome Location chr9:108354230-108354231
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:108321600-108360200 Weak transcription HSMM muscle
2 chr9:108321600-108397200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr9:108325400-108357200 Weak transcription A549 lung
4 chr9:108328000-108372800 Weak transcription NHEK skin
5 chr9:108330800-108366200 Weak transcription Muscle Satellite Cultured Cells --
6 chr9:108333200-108400400 Weak transcription HMEC breast
7 chr9:108334200-108368200 Weak transcription Gastric stomach
8 chr9:108335400-108403400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr9:108336000-108366200 Weak transcription NHDF-Ad bronchial
10 chr9:108337800-108354800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr9:108338400-108354400 Weak transcription Colon Smooth Muscle Colon
12 chr9:108338400-108358000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr9:108338400-108366200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr9:108338400-108371600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr9:108338400-108403400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr9:108340200-108372800 Weak transcription Pancreas Pancrea
17 chr9:108345600-108400000 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr9:108347000-108399600 Weak transcription Psoas Muscle Psoas
19 chr9:108349400-108402200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr9:108349600-108355400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr9:108350800-108354600 Strong transcription Primary T cells fromperipheralblood blood
22 chr9:108350800-108403800 Weak transcription Fetal Heart heart
23 chr9:108351000-108355400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr9:108351600-108355000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr9:108352000-108354400 ZNF genes & repeats Dnd41 blood
26 chr9:108352000-108354800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr9:108352200-108354600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
28 chr9:108352200-108354600 ZNF genes & repeats GM12878-XiMat blood
29 chr9:108352400-108354600 ZNF genes & repeats Primary monocytes fromperipheralblood blood
30 chr9:108352400-108354800 ZNF genes & repeats Fetal Intestine Small intestine
31 chr9:108352400-108355200 ZNF genes & repeats Primary hematopoietic stem cells blood
32 chr9:108352600-108354400 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
33 chr9:108352600-108354600 ZNF genes & repeats Primary B cells from peripheral blood blood
34 chr9:108352600-108355000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
35 chr9:108352600-108355200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
36 chr9:108352600-108382400 Weak transcription Stomach Smooth Muscle stomach
37 chr9:108352800-108354400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
38 chr9:108352800-108354600 ZNF genes & repeats Primary T cells from cord blood blood
39 chr9:108352800-108354600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
40 chr9:108352800-108355000 ZNF genes & repeats Fetal Brain Female brain
41 chr9:108352800-108355200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
42 chr9:108352800-108355200 ZNF genes & repeats Brain Germinal Matrix brain
43 chr9:108353000-108354400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr9:108353000-108354400 ZNF genes & repeats Fetal Muscle Trunk muscle
45 chr9:108353000-108354600 ZNF genes & repeats Aorta Aorta
46 chr9:108353000-108354600 ZNF genes & repeats Fetal Muscle Leg muscle
47 chr9:108353000-108354600 ZNF genes & repeats Thymus Thymus
48 chr9:108353000-108354800 ZNF genes & repeats Fetal Stomach stomach
49 chr9:108353000-108366000 Weak transcription Osteobl bone
50 chr9:108353200-108354400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015