The 2.0 version of rSNPBase

Variant report

Variant rs2768292
Chromosome Location chr9:108353498-108353499
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:108321600-108353600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr9:108321600-108354000 Weak transcription Right Ventricle heart
3 chr9:108321600-108360200 Weak transcription HSMM muscle
4 chr9:108321600-108397200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr9:108324800-108353800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr9:108325400-108357200 Weak transcription A549 lung
7 chr9:108325600-108353800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr9:108325800-108353800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr9:108328000-108372800 Weak transcription NHEK skin
10 chr9:108330800-108366200 Weak transcription Muscle Satellite Cultured Cells --
11 chr9:108333200-108400400 Weak transcription HMEC breast
12 chr9:108334200-108368200 Weak transcription Gastric stomach
13 chr9:108335400-108403400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr9:108336000-108366200 Weak transcription NHDF-Ad bronchial
15 chr9:108336400-108353800 Weak transcription Brain Angular Gyrus brain
16 chr9:108337600-108353800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr9:108337800-108354800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr9:108338400-108353800 Weak transcription Adipose Nuclei Adipose
19 chr9:108338400-108353800 Weak transcription Brain Cingulate Gyrus brain
20 chr9:108338400-108354200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr9:108338400-108354400 Weak transcription Colon Smooth Muscle Colon
22 chr9:108338400-108358000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr9:108338400-108366200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr9:108338400-108371600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr9:108338400-108403400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr9:108340200-108372800 Weak transcription Pancreas Pancrea
27 chr9:108342800-108353800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr9:108343000-108353600 Weak transcription Small Intestine intestine
29 chr9:108343000-108353800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr9:108345600-108400000 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr9:108347000-108399600 Weak transcription Psoas Muscle Psoas
32 chr9:108349400-108402200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr9:108349600-108355400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr9:108349800-108353800 Weak transcription Lung lung
35 chr9:108350800-108353800 Strong transcription Fetal Intestine Large intestine
36 chr9:108350800-108354600 Strong transcription Primary T cells fromperipheralblood blood
37 chr9:108350800-108403800 Weak transcription Fetal Heart heart
38 chr9:108351000-108353800 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr9:108351000-108353800 Weak transcription Esophagus oesophagus
40 chr9:108351000-108355400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr9:108351400-108353800 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr9:108351600-108354000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr9:108351600-108355000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr9:108352000-108354400 ZNF genes & repeats Dnd41 blood
45 chr9:108352000-108354800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr9:108352200-108354200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr9:108352200-108354600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
48 chr9:108352200-108354600 ZNF genes & repeats GM12878-XiMat blood
49 chr9:108352400-108353600 Weak transcription Placenta Placenta
50 chr9:108352400-108353600 Strong transcription Left Ventricle heart

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Last update: Aug 31, 2015