Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10014366	0.95[ASN][1000 genomes]
rs10213414	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs11934703	0.96[ASN][1000 genomes]
rs12645768	0.82[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs13435788	0.89[ASN][1000 genomes]
rs17725979	0.98[ASN][1000 genomes]
rs2051709	0.95[ASN][1000 genomes]
rs2520490	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4287984	0.96[ASN][1000 genomes]
rs4355370	0.87[ASN][1000 genomes]
rs4449392	0.96[ASN][1000 genomes]
rs4455396	0.96[ASN][1000 genomes]
rs4485801	0.96[ASN][1000 genomes]
rs4527452	0.88[ASN][1000 genomes]
rs4532218	0.88[ASN][1000 genomes]
rs4616731	0.87[ASN][1000 genomes]
rs4835555	0.95[ASN][1000 genomes]
rs67046168	0.92[ASN][1000 genomes]
rs6832649	0.91[ASN][1000 genomes]
rs6851434	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs764005	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7668770	0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7673586	0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7690129	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2520492	DCLK2	cis	parietal	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149925000-149926200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:149925000-149926600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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