Variant report

Variant	rs7690129
Chromosome Location	chr4:149909718-149909719
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10014366	0.88[ASN][1000 genomes]
rs11934703	0.84[ASN][1000 genomes]
rs17725979	0.86[ASN][1000 genomes]
rs2051709	0.88[ASN][1000 genomes]
rs2520490	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2520492	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4287984	0.82[ASN][1000 genomes]
rs4449392	0.84[ASN][1000 genomes]
rs4455396	0.83[ASN][1000 genomes]
rs4485801	0.84[ASN][1000 genomes]
rs4835555	0.83[ASN][1000 genomes]
rs67046168	0.85[ASN][1000 genomes]
rs6851434	0.83[ASN][1000 genomes]
rs764005	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149907800-149909800	Enhancers	Rectal Mucosa Donor 29	rectum
2	chr4:149907800-149910000	Enhancers	Stomach Mucosa	stomach
3	chr4:149907800-149910400	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr4:149909600-149909800	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr4:149909600-149910800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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