Variant report

Variant rs2535417
Chromosome Location chr12:681832-681833
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:677400-682000 Enhancers Fetal Heart heart
2 chr12:679600-684200 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr12:679600-684800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr12:679600-685000 Weak transcription Primary B cells from cord blood blood
5 chr12:679800-684600 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr12:679800-684600 Weak transcription Dnd41 blood
7 chr12:679800-684800 Weak transcription Primary B cells from peripheral blood blood
8 chr12:679800-684800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr12:679800-684800 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr12:679800-684800 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr12:679800-684800 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr12:679800-684800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr12:679800-684800 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr12:679800-685000 Weak transcription Primary T cells from cord blood blood
15 chr12:679800-685000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr12:679800-685000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr12:679800-685000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr12:679800-685000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr12:679800-685000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr12:679800-685000 Weak transcription GM12878-XiMat blood
21 chr12:680000-684200 Weak transcription Primary T cells fromperipheralblood blood
22 chr12:680000-684800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr12:680000-685000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr12:680000-685400 Weak transcription Fetal Brain Male brain
25 chr12:680200-682000 Enhancers Gastric stomach
26 chr12:680200-682000 Enhancers HUVEC blood vessel
27 chr12:680200-684200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr12:680200-686000 Enhancers Placenta Placenta
29 chr12:680400-682000 Enhancers Sigmoid Colon Sigmoid Colon
30 chr12:680400-685400 Weak transcription Fetal Brain Female brain
31 chr12:680600-682000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr12:680600-682000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr12:680600-682000 Enhancers Stomach Mucosa stomach
34 chr12:680600-683200 Enhancers Right Atrium heart
35 chr12:680600-684200 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr12:680600-684600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr12:680600-685000 Weak transcription Fetal Intestine Large intestine
38 chr12:680600-685200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr12:680600-685400 Weak transcription Brain Germinal Matrix brain
40 chr12:680800-682000 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr12:680800-682000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr12:680800-682000 Enhancers Left Ventricle heart
43 chr12:680800-682000 Enhancers Rectal Mucosa Donor 29 rectum
44 chr12:680800-682000 Enhancers Right Ventricle heart
45 chr12:680800-682000 Flanking Active TSS A549 lung
46 chr12:680800-682000 Flanking Active TSS Hela-S3 cervix
47 chr12:680800-682000 Enhancers NHEK skin
48 chr12:680800-684400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr12:680800-685200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr12:680800-688000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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