Variant report

Variant rs2607938
Chromosome Location chr12:685007-685008
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:680000-685400 Weak transcription Fetal Brain Male brain
2 chr12:680200-686000 Enhancers Placenta Placenta
3 chr12:680400-685400 Weak transcription Fetal Brain Female brain
4 chr12:680600-685200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr12:680600-685400 Weak transcription Brain Germinal Matrix brain
6 chr12:680800-685200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr12:680800-688000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr12:681000-688000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr12:681200-685200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr12:681400-685200 Enhancers Adipose Nuclei Adipose
11 chr12:681600-685200 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr12:681600-685600 Weak transcription Pancreas Pancrea
13 chr12:681600-687400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr12:681800-685600 Weak transcription Psoas Muscle Psoas
15 chr12:682000-690600 Enhancers HepG2 liver
16 chr12:682000-692800 Weak transcription Gastric stomach
17 chr12:683400-686200 Enhancers Fetal Stomach stomach
18 chr12:683600-685400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr12:683600-685400 Enhancers Osteobl bone
20 chr12:683600-686000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr12:683600-686000 Enhancers HMEC breast
22 chr12:683600-686400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr12:683800-685200 Enhancers Muscle Satellite Cultured Cells --
24 chr12:683800-685400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr12:683800-685400 Enhancers Rectal Smooth Muscle rectum
26 chr12:683800-685800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr12:683800-685800 Enhancers Colon Smooth Muscle Colon
28 chr12:683800-685800 Enhancers HSMMtube muscle
29 chr12:683800-686000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr12:683800-686000 Enhancers HSMM muscle
31 chr12:683800-686200 Enhancers K562 blood
32 chr12:684000-685200 Enhancers Brain Anterior Caudate brain
33 chr12:684000-685200 Enhancers Brain Hippocampus Middle brain
34 chr12:684000-685400 Enhancers NHDF-Ad bronchial
35 chr12:684000-685800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr12:684000-686400 Enhancers A549 lung
37 chr12:684200-685200 Enhancers Primary neutrophils fromperipheralblood blood
38 chr12:684200-685200 Enhancers Skeletal Muscle Male skeletal muscle
39 chr12:684200-685400 Enhancers Primary T cells fromperipheralblood blood
40 chr12:684200-686000 Enhancers Esophagus oesophagus
41 chr12:684200-686000 Enhancers Left Ventricle heart
42 chr12:684200-686000 Enhancers Placenta Amnion Placenta Amnion
43 chr12:684200-686200 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr12:684200-686200 Enhancers Fetal Muscle Leg muscle
45 chr12:684400-685200 Enhancers Right Atrium heart
46 chr12:684400-685400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr12:684400-685400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr12:684400-685400 Enhancers NHLF lung
49 chr12:684400-685800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr12:684400-686000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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