Variant report

Variant	rs255214
Chromosome Location	chr5:94171668-94171669
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10059576	0.80[ASN][1000 genomes]
rs1027741	0.80[ASN][1000 genomes]
rs12653136	0.80[ASN][1000 genomes]
rs12657029	0.80[ASN][1000 genomes]
rs149198	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs153900	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs159602	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs255212	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs255367	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35448590	0.80[ASN][1000 genomes]
rs36014084	0.80[ASN][1000 genomes]
rs4143487	0.88[ASN][1000 genomes]
rs6871880	0.80[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94130400-94192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr5:94162400-94184800	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr5:94163400-94182600	Weak transcription	Brain Anterior Caudate	brain
4	chr5:94163800-94209800	Weak transcription	Dnd41	blood
5	chr5:94164000-94185800	Weak transcription	Primary T cells from cord blood	blood
6	chr5:94165000-94240800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr5:94165200-94183400	Weak transcription	Lung	lung
8	chr5:94165400-94185600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr5:94165600-94182200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr5:94165800-94172800	Weak transcription	HUVEC	blood vessel
11	chr5:94165800-94182400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr5:94165800-94183400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr5:94165800-94206200	Weak transcription	Adipose Nuclei	Adipose
14	chr5:94166000-94172200	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr5:94168800-94176800	Weak transcription	Thymus	Thymus
16	chr5:94169200-94185800	Weak transcription	Fetal Brain Female	brain
17	chr5:94170200-94182600	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr5:94170400-94173000	Strong transcription	Primary hematopoietic stem cells	blood
19	chr5:94170400-94174600	Strong transcription	Primary monocytes fromperipheralblood	blood
20	chr5:94170600-94173000	Genic enhancers	Fetal Thymus	thymus
21	chr5:94170600-94187400	Strong transcription	Monocytes-CD14+_RO01746	blood
22	chr5:94170800-94185200	Weak transcription	Fetal Brain Male	brain
23	chr5:94171600-94185200	Weak transcription	Left Ventricle	heart

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